LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva03g01715	ATGCCTCGTCACATTAACTGCATCTTTTGTAGAAATAGATGGAACTCATGCTGCAGTTTCATGTGCATTTACCTGTCCTTCCTTATAATAATCATCGccgttttcattttcattctggCTGTTGCTATCTGGTCCTTCACTTTTCCTTCTGATGTAACCTTCCATGTAACAGAAGCTTCCCTGAAGCAGTTCAATCTCACTGCCAACAACACCCTCTTTTACAATCTCAGGCTAAACGCCACCGCCAGAAACCCCAGCAAGAGAGTCACTTTCGACTACAAACGCATCACAGTTACTGCTTCTTACAAGGAAAACCAATTTGATAAGCTGAATTTGATTGTGACACCGTTTCACCAAGCTCACAAGAACACAACATCGTTGATGTTGCCAGTGATCCAAGGGCAACAAGTTCTTAAACTTAAGACTAAGGAAGTTACTGAATATAATGAAGAGACAAGTGCTGGGGTTTATAATATTGATGTTGATCTGGATATTCGAGTGAGGAAGAAGGTGGGCTTGATCAAGTATCATGAAAGTTGGAATCTGGTGTGTAATTTGAAGGTGCCTGTGAGTTCAAACGACAAGTCGGTTATTCCTTTTAACAAAACCGAGTGTAAGGGTCCACCAAATGAAGACACAAGTGCTGCAGCTTCGGGGTTTTCAACATTTTCGCCCACTTTTGGTAGTGGTACTGGGTTTTCTGCCAGCAGGCcata	716	0.4092	MPRHINCIFCRNRWNSCCSFMCIYLSFLIIIIAVFIFILAVAIWSFTFPSDVTFHVTEASLKQFNLTANNTLFYNLRLNATARNPSKRVTFDYKRITVTASYKENQFDKLNLIVTPFHQAHKNTTSLMLPVIQGQQVLKLKTKEVTEYNEETSAGVYNIDVDLDIRVRKKVGLIKYHESWNLVCNLKVPVSSNDKSVIPFNKTECKGPPNEDTSAAASGFSTFSPTFGSGTGFSASRP	238

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva03g01715	238	PANTHER	LATE EMBRYOGENESIS ABUNDANT PROTEIN	15	207	-	-
	Bva03g01715	238	Pfam	Late embryogenesis abundant protein	80	174	IPR004864	-
	Bva03g01715	238	PANTHER	OS05G0367900 PROTEIN	15	207	IPR044839	GO:0098542

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva03g01715	Bva-Chr3	15441142	15441858	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva03g01715	51	215	SNARE and Associated Proteins	AT1G32270	33.929	3.98e-15	71.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva03g01715	-		-	gmx:100780503	164.851