Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01706 ATGGAATCTGAGAGGAACAGTGAGACTAAACTAGtagtagaagaagaagaagaagagaggaatGAGATCCTCAAGAGAAGAATCTCCAGCCATCCTTTGTATGGACTACTGCTTGACGCTCACATGGAGTGCTTGAAGGTTGGTGACATGGCAATAAACATGGACAACGAGCAGAAGATAGCCCAGAAAGAAGCCACGAAAAAGCACAACTTGGGCATGTTAAACCAGAATGAGCTTGATCTCTTCATGGAAGCATATTGCTTGGCACTAGGCAAGCTCAAAGAAGCAATGGAGGAACCTCAACAGAGGTCCATGGCTTTCATCAACAGCATGCATTCTCAACTTAGGGAGCTGACTATTGAGCATGCTGCTGCAACATCTTCTGATGACAGCAAAAACCAAGATGATTCTTCAATTTA 419 0.4129 MESERNSETKLVVEEEEEERNEILKRRISSHPLYGLLLDAHMECLKVGDMAINMDNEQKIAQKEATKKHNLGMLNQNELDLFMEAYCLALGKLKEAMEEPQQRSMAFINSMHSQLRELTIEHAAATSSDDSKNQDDSSI 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01706 139 PANTHER FUSED COMPOUND LEAF 1 10 123 - -
Bva03g01706 139 Pfam KNOX1 domain 24 48 IPR005540 GO:0003677|GO:0005634
Bva03g01706 139 SMART KNOX2_2 69 120 IPR005541 GO:0003677|GO:0005634
Bva03g01706 139 Coils Coil 6 26 - -
Bva03g01706 139 Pfam KNOX2 domain 76 119 IPR005541 GO:0003677|GO:0005634
Bva03g01706 139 SMART KNOX1_2 22 63 IPR005540 GO:0003677|GO:0005634
Bva03g01706 139 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 10 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01706 Bva-Chr3 15392038 15395241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01706 23 131 Homeobox Transcription Factor Family AT1G70510 34.167 2.11e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01706 - - gmx:100790124 160.614