Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01701 ATGTGGAGGATGCCAAAGAGCGCCGGCGAAGGagggaggaggaggagggggAGCGGAGACGGCGGCGCTGGCGATGAGTCATCGTCGGAGGAGGAAAGGTTTGAGGAAGAAGAGTCGATGAACAAACCGTCGTGGATAATGCTGGGGATCCGTTTCGCTTTATGCTGGAGCGATCCCGTCGATGTTAgtaattcatttcatttgagaGGTGGCGGAATGGGGCCTAGCGGCGGTTGGCGGCGGTTTGTGATACATCCCGATAACTGGTGGTACACAGTATGGAAGCATTTTATTCTGATATGGGCGGTGTATTCTTCCTTCTTCACGCCCATGGAGTTTGGATTCTTCAGAGGGTTGCCGGAGAAAATCTTCCTCCTTGACATTGCCGGACAGTTAGCTTTCCTTGTTGACATCATCATCCGGTTCTTCGTCGCCTACCGTGACACCCATTCCTATTGCATGGTATACAATCGCGATCAGATTGCCATGAGGTACTTGAAGTCTCGCTTCATGGTTGATTTTCTCAGTTGTCTTCCGTGGGATGCTATCTATAAGGCTACTGGCAGAAAAGAGCCAGTCAGGTATCTTCTATGGATTAGGCTAAGTCGAGCATGTAGAGTGACTGAGTTTTTTGAGAAACTGGAGAAAGATATCAGGATCAATTACCTGTTTACGAGGATTGTGAAACTTATGGTTGTTGAACTCTATTGCACACACACGGCTGCCTGCATCTTCTACTATCTGGCAACCACTATGCCAGCTTCCAAGGAAGGTTACACATGGATAGGGAGCTTGAAGATGGGTGACTATAGCTATTCACACTTTAGAGAGATTGATCTTTGGAAGCGTTATATCACGTCGCTCTACTTTGCAATTGTTACCATGGCAACTGTTGgATACGGAGAGATTCACGCTGTCAATGTCAGGGAAATGATATTTGTCATGATTTATGTCTCCTTCGACATGATTCTTGGCGCTTACCTTCTCGGTAATATGACAGCTTTGATCGTGAAAGGATCAAAAACAGAGAGATTTAGGGATAAAATGACTGAACTTATTAAgtatatgaataaaaacaaactgGATAGGCAGATAAGTAAGGCAATTAAAGGCCATTTGCGCTTACAGTATGATCGTAGTTACACAGAAGCTACGGTTCTTCAGGACATCCCAACCTCTATTCGCACGAAGATTTCAATGAATTTGTACGAGCAGTTCATTCAGAAAGTTTCTCTTTTCAAGGGGTGCTCTTTGGGGTTCATTAAGCAGATTGCAATCAGAGTTCATGAGGAGTTTTTCCTCCCAGGAGAAGTGGTTATGGAGCAAGGAAATGTAGCAGATCAACTTTACTTTGTGTGTGACGGTGAGCTGGATGAGATAAGCAGGGAAGATGGTGAATGTGAAGAGTTAATTAATCACTTGCAAACCTATGGTTCCTTTGGCGAGGTTTCTTTCCTTTGCAATATGCCTCAACCTTCTACGGTTCGTGCTCATGAATTTTGTAAGGTTTTGCGACTTGATAAGCAATCCTTCACAGAAACGCTAAAGATATACTTTTTTGATGGTCGAGTCATCTTGAACAATCTGCTTGAGGGAAAAGACTCCATTCTTCAGAGAAAGCTTTTGGAATCAGACTTCACCCTGATCATTGGAAATTATGAATCCGAGCTGGCCATGAGGATTAATTGTGCCGCATATGAGGGAGACTTTTATCCGTTGAAACGTTTGATTGGATCTGGAGCTGATCCCAATAAGACAGATTATGATGGAAGATCGCCCTTGCTTATCGCTGCATCCAAAGGATATGTAGATAttgcttcttttcttattaaacAAGGAGCAAACGTTGACTTGGCAGATAAGTTTGGGAATACTCCCTTGCTCGAAGCCATCAAGAATGAACATGAAGATGTCGCCTCTTTACTTTTTCATGCGGGGGCAACTCTTACCATCAATGATGCCGGAAACTTTCTATGCATAACTGTTGCAAAGAGGGAGGCAGAGCTTTTAAAGAAGCTTTTGGCGTATGGTATTAATCCAAATGCCAAAAATTTTGATCAGCGAACACCACTTCATGTAGCTGCCTCTGAAGGTTTTTTTACAATGGCCGAATTACTTCTAGAAGCAGGAGCAAGTGTTTTGTCAAAGGACAGATGGGGAAATACACCTCTTGATGAAGCTCGTACAGGAGGAGGTGGGAAAATGATCAAAATGCTTGAAGTTGCAAAAATTTCTCAGCTGGCTGAATTGTCCAATAGCATTCAAGGAAGTCGAGATGGAATTCCGAAAAAGAAATGCACAGTGTTCCCTTTTCACCCGTGGGATAACAAGGAGGATAGAAGAGAGGGAGTTGTCCTATGGGTTCCACAAAGCATTGAAGAGCTCATAATGGCAGCCATGAAGCACATGAATTCTTCTAGtgcatcttatattttatcagaACATGGGGGTAAGGTTCTTGATGTAGACATGATTGACAATAATGAGAAGCTATTTCTGGTAAGTGAAACACAGAAAGAGGTGAAATTATTGGATAGAGATGAGGTATA 2549 0.4186 MWRMPKSAGEGGRRRRGSGDGGAGDESSSEEERFEEEESMNKPSWIMLGIRFALCWSDPVDVSNSFHLRGGGMGPSGGWRRFVIHPDNWWYTVWKHFILIWAVYSSFFTPMEFGFFRGLPEKIFLLDIAGQLAFLVDIIIRFFVAYRDTHSYCMVYNRDQIAMRYLKSRFMVDFLSCLPWDAIYKATGRKEPVRYLLWIRLSRACRVTEFFEKLEKDIRINYLFTRIVKLMVVELYCTHTAACIFYYLATTMPASKEGYTWIGSLKMGDYSYSHFREIDLWKRYITSLYFAIVTMATVGYGEIHAVNVREMIFVMIYVSFDMILGAYLLGNMTALIVKGSKTERFRDKMTELIKYMNKNKLDRQISKAIKGHLRLQYDRSYTEATVLQDIPTSIRTKISMNLYEQFIQKVSLFKGCSLGFIKQIAIRVHEEFFLPGEVVMEQGNVADQLYFVCDGELDEISREDGECEELINHLQTYGSFGEVSFLCNMPQPSTVRAHEFCKVLRLDKQSFTETLKIYFFDGRVILNNLLEGKDSILQRKLLESDFTLIIGNYESELAMRINCAAYEGDFYPLKRLIGSGADPNKTDYDGRSPLLIAASKGYVDIASFLIKQGANVDLADKFGNTPLLEAIKNEHEDVASLLFHAGATLTINDAGNFLCITVAKREAELLKKLLAYGINPNAKNFDQRTPLHVAASEGFFTMAELLLEAGASVLSKDRWGNTPLDEARTGGGGKMIKMLEVAKISQLAELSNSIQGSRDGIPKKKCTVFPFHPWDNKEDRREGVVLWVPQSIEELIMAAMKHMNSSSASYILSEHGGKVLDVDMIDNNEKLFLVSETQKEVKLLDRDEV 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01701 849 SMART ANK_2a 686 715 IPR002110 GO:0005515
Bva03g01701 849 SMART ANK_2a 556 585 IPR002110 GO:0005515
Bva03g01701 849 SMART ANK_2a 622 651 IPR002110 GO:0005515
Bva03g01701 849 SMART ANK_2a 653 682 IPR002110 GO:0005515
Bva03g01701 849 SMART ANK_2a 589 618 IPR002110 GO:0005515
Bva03g01701 849 PANTHER POTASSIUM CHANNEL AKT1 27 837 IPR045319 GO:0005249|GO:0006813
Bva03g01701 849 CDD CAP_ED 412 526 IPR000595 -
Bva03g01701 849 Pfam Cyclic nucleotide-binding domain 432 516 IPR000595 -
Bva03g01701 849 ProSiteProfiles Ankyrin repeat profile. 686 718 IPR002110 GO:0005515
Bva03g01701 849 SUPERFAMILY cAMP-binding domain-like 340 530 IPR018490 -
Bva03g01701 849 Pfam Ion transport protein 92 336 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva03g01701 849 Gene3D Helix hairpin bin 339 399 - -
Bva03g01701 849 MobiDBLite consensus disorder prediction 1 38 - -
Bva03g01701 849 ProSiteProfiles KHA domain profile. 765 849 IPR021789 -
Bva03g01701 849 Pfam Ankyrin repeats (many copies) 673 727 IPR002110 GO:0005515
Bva03g01701 849 Gene3D Jelly Rolls 400 523 IPR014710 -
Bva03g01701 849 Gene3D - 92 338 - -
Bva03g01701 849 ProSiteProfiles Ankyrin repeat profile. 589 621 IPR002110 GO:0005515
Bva03g01701 849 ProSiteProfiles Ankyrin repeat region circular profile. 686 718 - -
Bva03g01701 849 Gene3D - 558 741 IPR036770 -
Bva03g01701 849 ProSiteProfiles Ankyrin repeat region circular profile. 622 653 - -
Bva03g01701 849 ProSiteProfiles Ankyrin repeat profile. 622 654 IPR002110 GO:0005515
Bva03g01701 849 PANTHER POTASSIUM CHANNEL SKOR-LIKE 27 837 - -
Bva03g01701 849 PRINTS EAG/ELK/ERG potassium channel family signature 127 137 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva03g01701 849 PRINTS EAG/ELK/ERG potassium channel family signature 236 246 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva03g01701 849 PRINTS EAG/ELK/ERG potassium channel family signature 328 337 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva03g01701 849 PRINTS EAG/ELK/ERG potassium channel family signature 284 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva03g01701 849 SUPERFAMILY Voltage-gated potassium channels 85 337 - -
Bva03g01701 849 Pfam Ankyrin repeats (3 copies) 563 653 IPR002110 GO:0005515
Bva03g01701 849 SMART cnmp_10 412 530 IPR000595 -
Bva03g01701 849 SUPERFAMILY Ankyrin repeat 561 739 IPR036770 -
Bva03g01701 849 Pfam KHA, dimerisation domain of potassium ion channel 764 833 IPR021789 -
Bva03g01701 849 ProSiteProfiles Ankyrin repeat region circular profile. 589 621 - -
Bva03g01701 849 ProSiteProfiles cAMP/cGMP binding motif profile. 412 515 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01701 Bva-Chr3 15369260 15376280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01701 584 739 Ion Channels AT5G37500 25.243 5.46e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01701 K21867 - jre:108993203 1146.72