Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01699 ATGGTTCTAGGCTGGGGAAGAAGGAAGAACAGCCACCGGCGGGGGCGCAAACCCGAAATGGAGCTGGTGATTCCAAACCATTTCAGGTGCCCAGTTTCTCTTGATTTGATGAAAGATCCTGTGACATTGTCTACTGGGATCACCTATGATAGGGAAAGCATTGAAAGGTGGTTTGAAGATGGGAATTACACATGCCCTGTTACCAATCAGATTCTGAGAAACTTTGATCTGATTCCCAACCATACACTTAGAATAATGATTCAAGATTGGTGTGTAGATAATAAGCAACATGGAGTTGAGAGAATCCCAACTCCAAGAATACCCATCAACCCAGCAGAGGTCTCTGAGGTTCTCCTGCACATAAAGGCCTCTGCTAGACGCTCAGATCCATTTGGGTGCTCAGAATTAGTGCAGAAAATAAAGAGGTGGGGTGAAGAGAGTGAGAGAAACAAGAGGTGTATTGTGGAGAATGGAGCTTCTGGTGCATTGGCCTCTGCATTTGATGCTTTTGCTAATGACTCTGTAGAAACGCATGCAGGTGTTTTAGAAGAGATTTTATCTGCTCTCAATTGGACATTTCCTCTGCAATTGGAAGCCCAGAAATGTTTGGGATCCAAGGCTTCTTTACGTTGCATGGTTTGGTTTTTGAAGCACCAAGATCTTTCCGGGAAGCACAAGGCCATTGTTGCTCTCAAGgagcttctttcttttggcGATCAGCAGAATTTGGAGGCTCTGGCAGAAATTGAAGGAGTCAATGAGTTATTGGTGGGACTTATTAACAAGGGAATTTCCCCTACAATTACAAAAGCTTCATTGGCTGTGATCTTGTACATGGTTTCATCTTCTTACCCTTCTTGtgggaaaatgaaaacagcATTCATCGAAACTGGGTTGGTTTCTCTAGTGTTGGAGATTCTTATTGACTCAGAAAAGAGCCAATCTGAGAAGGCTTTGGGCATTCTGGACTCTCTCTGCACTTGTGAACAAGGGAGAGAAAAAGCTTATGGTAATGCTCTAACAGTTCCTGTGTTGGTGAAGAAAATTCTGCGAGTCTCGGCGTTGGCCACAGAGTACTCTGTTTCTGCTATTTGGAAGCTCTGCAAGAATGGAGATGATGAGGGGGAAAGAGTTCTAGTTGAGGCACTTCAAGTTGGTGCCTTTCAGAAACTCTTGTTAATATTGCAGGTAGGCTGTGGCGATTACACCAAAGAGAAAGCAACCGAGCTTCTGAAATTGTTGAATCCTTACAGGGCTGGCTTGGAATGCACAGAGACAGCAGATTTCAAGAATCTCAAGAGATCATTTTG 1310 0.4282 MVLGWGRRKNSHRRGRKPEMELVIPNHFRCPVSLDLMKDPVTLSTGITYDRESIERWFEDGNYTCPVTNQILRNFDLIPNHTLRIMIQDWCVDNKQHGVERIPTPRIPINPAEVSEVLLHIKASARRSDPFGCSELVQKIKRWGEESERNKRCIVENGASGALASAFDAFANDSVETHAGVLEEILSALNWTFPLQLEAQKCLGSKASLRCMVWFLKHQDLSGKHKAIVALKELLSFGDQQNLEALAEIEGVNELLVGLINKGISPTITKASLAVILYMVSSSYPSCGKMKTAFIETGLVSLVLEILIDSEKSQSEKALGILDSLCTCEQGREKAYGNALTVPVLVKKILRVSALATEYSVSAIWKLCKNGDDEGERVLVEALQVGAFQKLLLILQVGCGDYTKEKATELLKLLNPYRAGLECTETADFKNLKRSF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01699 436 PANTHER WDSAM1 PROTEIN 15 436 IPR045185 GO:0061630
Bva03g01699 436 SUPERFAMILY ARM repeat 129 413 IPR016024 -
Bva03g01699 436 ProSiteProfiles U-box domain profile. 23 97 IPR003613 GO:0004842|GO:0016567
Bva03g01699 436 SUPERFAMILY RING/U-box 19 100 - -
Bva03g01699 436 SMART Ubox_2 27 90 IPR003613 GO:0004842|GO:0016567
Bva03g01699 436 CDD RING-Ubox_PUB 28 70 IPR045210 -
Bva03g01699 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 7 102 IPR013083 -
Bva03g01699 436 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 15 436 - -
Bva03g01699 436 Pfam U-box domain 24 95 IPR003613 GO:0004842|GO:0016567
Bva03g01699 436 Gene3D - 119 414 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01699 Bva-Chr3 15362292 15363814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01699 17 436 U-box Gene Family AT5G37490 47.045 3.25e-121 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01699 - - gmx:100794340 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01699 03 15362292 15363814 Bva03g01699 03 15362292 15363814 BWGD