Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01690 ATGCCCCAGAATAAGATTTTCAATGACCCAACAACACCGAATCCGATTCCTGATCTTTCCCTGCACATTAGTCTCCCAAACAGTGCTCCTTCTTCAATCTGCACTGGCCAAAACGAAGGGGATTCTAATTCCTTTGATATATGGAGAAGTGATAATATCGATGGCTTGAAATCTTCCCACAGTGATAGTTCCATCAGAGACACAGAGCTCTCTCTTGCAGCCAATCCCACTAGTGGGTCTGAAGCTGAGAGCCCTTGGAGAAGAAACTTTCTTGTTAGAGGGAGAGAACCACAAGCTCCAAATCATGGGGTTTCAGAGGGAATAAGACCCATTAAAGGCATACCACTGTACAGTAATtgttcttttcccttttaccAGTTAGATAATTACAATTCCATAGAGAGGGAATCAAAGTTCCCTCTTTTCCCAGTTCCATACCCTTCAAATTTCTCTGCAAACTCAGGTTCTTATAGGACTCTAGAACCCATGTCAAGGTTTAATGGAATCACCATAGACAGTTTAAGACCCCAACATCATCAGCAGCAGCAGATTCAGTACCTAAATCAGAATCAGTTTGGGATTGGAGCTTCTGATTTCTCAAACGGATTCCTGAGGCCGAGAATCTTATTGCCAAGACCGCAGGGTAAGAGAAACATGAGAGCTCCTCGAATGCGTTGGACCAGCTCTCTTCATGCTCGGTTTATTCATGCTGTTGAGCTCCTCGGTGGCCATGAAAGGGCTACTCCCAAGTCAGTGTTGGAGCTCATGGATGTCAAAGATCTCACTCTTGCTCATGTAAAGAGCCATTTGCAGATGTATCGGACTGTTAAGAACACTGATAAACCTGCAGCTTCCTTAGATGGAGATGAAGATTTCATGATATCACCTCCTGGAAATCAAAATGAGAACTGTTTACTCAATCAGAGAGTTGGTGCAAATGCACCTCTAGATCATGATGTGCTGTGGGGCAATTCTTCCAGTGGAGAAGCATTTATACAAGCTAACTCCAGACATATGGATGGGGTCAGAGCAGCAGAAATCCCATCATCATATCAGCACATAATTGGGAAACACTCTGAGGCAAACAATTTTATACAACCAAGAAGCTTCaagaataattcaaatttagatTCTGATAATCCAAGCTTGGAGTTCACCTTAGGGAGATG 1169 0.4217 MPQNKIFNDPTTPNPIPDLSLHISLPNSAPSSICTGQNEGDSNSFDIWRSDNIDGLKSSHSDSSIRDTELSLAANPTSGSEAESPWRRNFLVRGREPQAPNHGVSEGIRPIKGIPLYSNCSFPFYQLDNYNSIERESKFPLFPVPYPSNFSANSGSYRTLEPMSRFNGITIDSLRPQHHQQQQIQYLNQNQFGIGASDFSNGFLRPRILLPRPQGKRNMRAPRMRWTSSLHARFIHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASLDGDEDFMISPPGNQNENCLLNQRVGANAPLDHDVLWGNSSSGEAFIQANSRHMDGVRAAEIPSSYQHIIGKHSEANNFIQPRSFKNNSNLDSDNPSLEFTLGR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01690 389 Gene3D - 221 278 - -
Bva03g01690 389 MobiDBLite consensus disorder prediction 368 389 - -
Bva03g01690 389 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 132 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bva03g01690 389 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 172 389 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bva03g01690 389 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 222 275 IPR006447 GO:0003677
Bva03g01690 389 Pfam Myb-like DNA-binding domain 223 274 IPR001005 -
Bva03g01690 389 SUPERFAMILY Homeodomain-like 219 276 IPR009057 -
Bva03g01690 389 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 132 - -
Bva03g01690 389 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 172 389 - -
Bva03g01690 389 MobiDBLite consensus disorder prediction 368 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01690 Bva-Chr3 15313204 15318779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01690 16 389 G2-like Transcription Factor Family AT5G16560 36.430 1.30e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva03g01690 Myb_DNA-binding 1.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01690 - - qsu:112040698 390.193