Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01683 ATGAAACCttcagaaagagagagagagacagcttcaaagaaaaggaaattaatggAAGGAGATAACTCATCAAATAATTCTGTATATAGAGAGTGCTTGAGAAACCATGCAGCCAGCCTCGGCAGCTACGCCACCGATGGCTGCGGCGAGTTTACCCTCGACGACACTTCCCCCGGCGGCCTCCAATGTGCTGCCTGCGGCTGCCACCGAAACTTCCACCGCAAAGTGACGTATCCGCCGGCCCACGGCAGAGGGGTCAGCTACAACAGCCGTGGGAGGGATACAGAAATGCTTACAGGTGACCTAATGGAATAcagcggcggcggcggcggcggcggtgATGGGAGGCCACCGAACATTATGTTGGACGGACAGGAGGGGGAGAGGAGTGGGAAGAAGCGGTTCAGGACCAAGTTTACAGCAGATCAGAAGGAAAAGATGCTTGCTTTTGCAGAGAAGCTTGGATGGAAGCTTCAAAGGAAAGATCTTGATGAGGAGATTGAGAGGTTCTGCAGAGGAGTTGGGATTAGTAGGCAAGTTTTCAAGGTGTGGATGCATAATCACAAgaactcttcttcttcatcttctgcaTCTACTGGCAATGCATCCTCTCTCACTAATCAGta 626 0.4313 MKPSERERETASKKRKLMEGDNSSNNSVYRECLRNHAASLGSYATDGCGEFTLDDTSPGGLQCAACGCHRNFHRKVTYPPAHGRGVSYNSRGRDTEMLTGDLMEYSGGGGGGGDGRPPNIMLDGQEGERSGKKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDEEIERFCRGVGISRQVFKVWMHNHKNSSSSSSASTGNASSLTNQ 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01683 208 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 132 190 IPR006455 -
Bva03g01683 208 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 29 76 IPR006456 -
Bva03g01683 208 MobiDBLite consensus disorder prediction 1 20 - -
Bva03g01683 208 MobiDBLite consensus disorder prediction 106 132 - -
Bva03g01683 208 MobiDBLite consensus disorder prediction 1 26 - -
Bva03g01683 208 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 29 75 IPR006456 -
Bva03g01683 208 MobiDBLite consensus disorder prediction 188 208 - -
Bva03g01683 208 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 19 198 - -
Bva03g01683 208 Pfam ZF-HD protein dimerisation region 28 77 IPR006456 -
Bva03g01683 208 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 11 19 198 - -
Bva03g01683 208 Gene3D - 121 196 - -
Bva03g01683 208 SUPERFAMILY Homeodomain-like 122 190 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01683 Bva-Chr3 15274126 15274752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01683 29 191 ZF-HD Transcription Factor Family AT4G24660 46.821 5.16e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva03g01683 ZF-HD_dimer 4.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01683 - - jre:109020973 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01683 03 15274126 15274752 Bva03g01683 03 15274126 15274752 BWGD