Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01682 ATGGATGGGGATCTTAACATACGTAATTGGGGATACTATGAACCTACAACATCCCTCAAGAGTCATCTTGGGCTCCAGCTTATGTCGTCCCTGCCAGAAAAACCACTGCTCGGAGCTCGCAGTTCAGCTGTTTTATCTGGTGGGAGTGAGGCATTTCACCCTAGGGACATGGGGATGCCACAAGCAACATACCCTATGGATTACACGAGGAATGTTTGGATGTACCAGAGAGAGAAACTTTTGAATATGACACCGACCAACCCCATTTATACTCCGGTTATGCTGGAGACGTCTTCAGCTCATCATATGCCAATGATTCAACCCCCTGATTTGTCAAAGGAGGAAAGGCTACCAGCACCAGCACCACCACCCATGGAAGAGACACCCTTTGAGAAGACCAATGGCAGTAATAAGAAGAGGCAGGGGCCCAAGGCTCCAAAATCTTCCAAGGCAAAGAAACTGAAGAGAGGGCCTCGCGTGCCGAAGGATGAGAATAATCCTTCAGTGCAACGAGCAAGGACTGCAAAGAAAACTActgaaattgtaattaacGGGATTGATATGGATATTTCCAGTATTCCTATTCCGGTTTGTTCGTGCACTGGGACACTTCAACAGTGTTACAGATGGGGTTCTGGTGGGTGGCAATCTGCATGTTGCACCACAAGCATGTCAGTGTATCCCTTGCCTATGAGTACCAAGCGGCGTGGTGCAAGGATAGCAGGAAGAAAAATGAGTATAGGAGCATTTAAGAAAGTCTTAGAGAAACTTGCAGCCGAGGGTTATGACTTTTCTAATCCGATTGATTTGAGGACTTATTGGGCAAAACATGGTACCAACAAGTTTGTCACTATCAGGTA 860 0.4593 MDGDLNIRNWGYYEPTTSLKSHLGLQLMSSLPEKPLLGARSSAVLSGGSEAFHPRDMGMPQATYPMDYTRNVWMYQREKLLNMTPTNPIYTPVMLETSSAHHMPMIQPPDLSKEERLPAPAPPPMEETPFEKTNGSNKKRQGPKAPKSSKAKKLKRGPRVPKDENNPSVQRARTAKKTTEIVINGIDMDISSIPIPVCSCTGTLQQCYRWGSGGWQSACCTTSMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYDFSNPIDLRTYWAKHGTNKFVTIR 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01682 286 SMART GAGA_bind_2 1 286 IPR010409 -
Bva03g01682 286 MobiDBLite consensus disorder prediction 103 176 - -
Bva03g01682 286 Pfam GAGA binding protein-like family 2 286 IPR010409 -
Bva03g01682 286 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 286 - -
Bva03g01682 286 PANTHER - 1 286 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01682 Bva-Chr3 15264330 15266103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01682 1 286 BBR or BPC Transcription factor family AT2G01930 51.342 6.76e-94 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Bva03g01682 GAGA_bind 4.1e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01682 - - gmx:100800718 424.861