Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01671 ATGTGCAGTAGAGGCCATTGGAGGCCAGCTGAAGACGAGAAACTTCGCGAGTTGGTTGAACGATATGGGCCCCATAATTGGAACGCCATAGCTGAAAAGCTCCGAGGAAGATCAGGTAAGAGCTGCAGGTTAAGGTGGTTCAATCAACTAGACCCAAGAATAAATAGAACTCCATTcacagaggaagaagaagagaggctTCTAGCTTCTCACCGGATTCATGGGAATAGATGGGCTGTAATTGCAAGGCTTTTTCCCGGACGGACTGATAACGCTGTCAAGAATCACTGGCATGTGATGATGGCAAGGATTCGCCGAGAAAGGTCCAAACTAAATGCAAAACGGCCTCTTAATCAGAGAAAGTTTTCTCCTAGCCACGAGGATCAgacaaattttaatgataCAAGGAATTTTCCTTATTCTTTTGTTGAGAAGTACCATGAAAAATATAGCCCTCCTTGTATCACATATAACCCCTTCCGACTTCCCAAGCAGTTTTACTTTCAAACGCCAAGTTCTTGTCCAACAATGCTTGAAGATAGAAGTCAATCAGTTGAGTTCTATGATTTTCTTCAAGTGAATACTGATTCAAATAGAAGTGAAGTGACAGATAATGCCAGAAGAGATGAGGAGGAAGTTAATCAAGTCGATGCTGTTGGACAACAGAGCAAGGATAGTGTTCCATTCATCGATTTTTTATCAGTTGGAAGCTG 713 0.4025 MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVMMARIRRERSKLNAKRPLNQRKFSPSHEDQTNFNDTRNFPYSFVEKYHEKYSPPCITYNPFRLPKQFYFQTPSSCPTMLEDRSQSVEFYDFLQVNTDSNRSEVTDNARRDEEEVNQVDAVGQQSKDSVPFIDFLSVGS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01671 237 MobiDBLite consensus disorder prediction 198 222 - -
Bva03g01671 237 Gene3D - 4 55 - -
Bva03g01671 237 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Bva03g01671 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Bva03g01671 237 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Bva03g01671 237 Pfam Myb-like DNA-binding domain 7 67 - -
Bva03g01671 237 PANTHER MYB-RELATED PROTEIN A-LIKE 1 237 - -
Bva03g01671 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Bva03g01671 237 CDD SANT 7 48 IPR001005 -
Bva03g01671 237 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Bva03g01671 237 Gene3D - 57 131 - -
Bva03g01671 237 CDD SANT 58 101 IPR001005 -
Bva03g01671 237 MobiDBLite consensus disorder prediction 201 215 - -
Bva03g01671 237 SMART sant 55 103 IPR001005 -
Bva03g01671 237 SMART sant 3 52 IPR001005 -
Bva03g01671 237 PANTHER MYB PROTEIN-RELATED 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01671 Bva-Chr3 15184445 15186459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01671 1 237 MYB Transcription Factor Family AT1G17950 57.831 3.14e-89 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva03g01671 Myb_DNA-bind_6 8.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01671 K09422 - gmx:100785170 355.525