Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01666 ATGGACGGTTTCGAAAAAGATGAGGTGCCGATGCTATCAGACACTCATCCCCAACTATCTGATGAACATGATTCTAAATTGCAGAAGCCTGTGGCCAGGACACGAAGTGCATCAATTTCCATTCCTATGAATTCCACAGAGTCATATGAGAGAGCAAATACTCTGATGGGACACACTGGTCCCTTACGAAGTGAGAGAAAAACTCCCTTTGTGCAGATGAGTGGTCCACTATATGTTACCCATAGACCTGGAAACCCTTTCCAGCAAAATAATGGAGTAAGAGTAAATATAGCTGTGGAGGGCAAGACAGAACAATTTCCTTCTTTCCATGGCACCAGTGAAAATGATTTGCAAGATAATTATGCTGGCAAAAATGAACATTTACTGAGGTCTGGGCAGCTGGGAATGTGTAATGATCCTTATTGTACAACTTGCCCAACTTACTTCAAGACTACTcaacaaagaaattcaaaaacttcGGGTATATTTGATCCTAAGTTGCATTATGCCTTATATGGCGATGCCAAGGGTTGTGCAAGAAGGTTTTTTGCTTTCCTGTATTCATACATTCCTGGAGTTATGAACCCACACGCTAAAGTTGTACAAAAATGGAACAAGTTCTTTGGCATTTCTTGCTTGGTAGCAATTTTTGTGGatccattatttttctttgtgattGCTGTACGGAAGGAGGAGTactgtatttttataaactgGCCAATGACAACAACACTCGTATTACTTAGAAGCATGAATGATTTTGTTTACTTCCTGAATATTCTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGAGACTAGGGTGGTTGGTGCCGGGGAGTTAGTTGACCATCCAAAGAAAATTGCACTTAATTACCTCCAGGGTTTTTTTATTGTTGACTTATTTGTTGTATTTCCACTTCCTCAGATCATGATATTGTTTGTCCTACCAAATTCGTTGGGGTCATCTGGAGCAAATTATGCTAAGAATCTTCTGCGTCTTGCAGTCCTTGTTCAGTATATTCCCAGATTGTGTAGATTTCTGCCTCTGCTAATTGGCCAATCACCAAGTGGACTCATATTTGAATCAGCCTGggcaaattttgttataaatctTCTCACCTTTATGCTATCTGGCCATGTTGTTGGGTCTTCCTGGTACCTATTTGGTTTACAGAGGGTTAATCAATGCCTAAGAGATGCCTGCCATGGAGATAAAATTGGTCATTGCACTACATTGATTGATTGTGGAAATGGCCTTGCTGACCTTTTGATGTGGAAAAACAATACTAATGCAAGTGCTTGCTTTACTGAAGATGGTTTTGAGTATGGTATCTATGTCAAAGCTGTCAATCTTACCACTAAACCTAATGTGCTCACCAGATATGTATATTCCGCGTTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGTAATTTAACCCCTAGCTATTTTGAATGGGAGGTCCTTTTCACAATGGCCATCATAGGAATGGGACTGTTGCTTTTTGCTCTTCTCATTGGAAATATACAAAACTTTCTTCAGGCTCTTGGACGGAGGAGACTAGAAATGTCACTAAGACGCCGTGATGTTGAGCAGTGGATGAGCCACCGACGCTTACCAAATGAACTAAGAAGGAGAGTACGGCAGGCTGAAAGGTACAACTGGGCTGCTACAAGGGGAGTGCATGAAGAAATGCTTTTGGAGAATTTGCCAGAAGATCTCCAGAGAGATATACGACGTCATCTCttcaaatttgttaaaaagGTCAGAATTTTTTCCCTGATGGATGAATCTATATTAGATGCCATTTGTGAGAGACTAAGACAGAAGACATACATCAAAGGAAGCAGAATTTTATATCGGGAAGGTCCGATAGAAAAGATGGTGTTTATTGTCCGTGGAAAATTGGAAAGTGTTGGAGAAGATGGAATTAGAGTTCCCTTAACTGAAGGGGGTGTTTGTGGTGAAGAACTTCTGACGTGGTGTCTTGAGCATTCTTCTGTAAACAAAGgACTTGGCCTCACTGCAAAAGATGGTTTCCCTACAGATGGTAAAAAAGTAAGGATTCCGGGGCAGCGGCTGCTTAGCAACAGAACAGTGATGTGTGTGACAAATGTGGAGGCATTTTCACTTCGAGCCTCAGACCTTGAAGAAGTCACAAGCCTTCTTTCAAGATTCTTGAGAAACACGCGTGTTCAAGGAGCTATAAGGTATGAATCTCCATATTGGAGATGCCTTGCAGCAACCCGTATTCAGGTTCAATGGAGATACAGGAAAAAACGTCTTAGTCGTGGTGATACTCAAAAACAAGCCCCAGGTTTGTA 2327 0.4018 MDGFEKDEVPMLSDTHPQLSDEHDSKLQKPVARTRSASISIPMNSTESYERANTLMGHTGPLRSERKTPFVQMSGPLYVTHRPGNPFQQNNGVRVNIAVEGKTEQFPSFHGTSENDLQDNYAGKNEHLLRSGQLGMCNDPYCTTCPTYFKTTQQRNSKTSGIFDPKLHYALYGDAKGCARRFFAFLYSYIPGVMNPHAKVVQKWNKFFGISCLVAIFVDPLFFFVIAVRKEEYCIFINWPMTTTLVLLRSMNDFVYFLNILLQFRLAYVAPETRVVGAGELVDHPKKIALNYLQGFFIVDLFVVFPLPQIMILFVLPNSLGSSGANYAKNLLRLAVLVQYIPRLCRFLPLLIGQSPSGLIFESAWANFVINLLTFMLSGHVVGSSWYLFGLQRVNQCLRDACHGDKIGHCTTLIDCGNGLADLLMWKNNTNASACFTEDGFEYGIYVKAVNLTTKPNVLTRYVYSAFWGFQQISTLAGNLTPSYFEWEVLFTMAIIGMGLLLFALLIGNIQNFLQALGRRRLEMSLRRRDVEQWMSHRRLPNELRRRVRQAERYNWAATRGVHEEMLLENLPEDLQRDIRRHLFKFVKKVRIFSLMDESILDAICERLRQKTYIKGSRILYREGPIEKMVFIVRGKLESVGEDGIRVPLTEGGVCGEELLTWCLEHSSVNKGLGLTAKDGFPTDGKKVRIPGQRLLSNRTVMCVTNVEAFSLRASDLEEVTSLLSRFLRNTRVQGAIRYESPYWRCLAATRIQVQWRYRKKRLSRGDTQKQAPGL 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01666 775 MobiDBLite consensus disorder prediction 31 49 - -
Bva03g01666 775 MobiDBLite consensus disorder prediction 1 30 - -
Bva03g01666 775 CDD CAP_ED 592 720 IPR000595 -
Bva03g01666 775 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 769 - -
Bva03g01666 775 Gene3D Helix hairpin bin 520 584 - -
Bva03g01666 775 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 769 - -
Bva03g01666 775 Pfam Ion transport protein 205 520 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva03g01666 775 Gene3D Jelly Rolls 590 725 IPR014710 -
Bva03g01666 775 ProSiteProfiles cAMP/cGMP binding motif profile. 592 660 IPR000595 -
Bva03g01666 775 Gene3D - 205 517 - -
Bva03g01666 775 MobiDBLite consensus disorder prediction 1 49 - -
Bva03g01666 775 SUPERFAMILY Voltage-gated potassium channels 199 521 - -
Bva03g01666 775 SUPERFAMILY cAMP-binding domain-like 520 722 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01666 Bva-Chr3 15136710 15147395 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01666 5 672 Ion Channels AT3G17700 63.650 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01666 K05391 - tcc:18587138 1149.04