Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01664 ATGGAGTACGGCAGTGGAGGCGGTGGGTCTCCTGAGGACCATGATGGTTCTGATTCCCAGAGGAGGAAAAAGCGCTACCATCGTCACACTGCTCACCAAATTCAGAGGCTCGAATCACTGTTCAAAGAATGCCCTCATCCAGATGAGAAGCAGAGATTGCAGTTAAGCAGGGAGTTAGGCTTGGCCCCTAGACAGATCAAATTTTGGTTCCAGAACAGGCGGACCCAGATGAAGGCCCAGCACGAAAGAGCTGATAACTGTGGACTTCGGTCAGAGAATGACAAAATACGGTGTGAGAACATAGCAATGAGAGAGGCACTGAAAAATGTCATCTGCCCCTCTTGTGGTGGTCCTCCCCTCAACGAGGATTCCTATTTTGATGAGCAGAAGTTGCGATTGGAGAATGCCCATTTGAAAGAAGAGCTTGATAGAGTGTCTAGCATTGCAGCTAAGTACATGGGAAGGCCAATTTCTCAGCTTCCACCAGTTCAGCCCATTCATGTATCATCTCTTGACTTGTCAATGGGAAGTTTTGGAAACCAAGTTTTGGGTCGCCCTTCCCTTGATCTTGATCTTCTCCCAGGGAGTTCTTCGTCCATACCAAATTTGCCTTACCAACCTCCTTGTCTTTCAGACATGGACAAGTCACTCATGACAGACATTTCTGCCAATGCCATGGAAGAACTGCTGAGGCTTCTGCAGACTAATGATCCCTTGTGGATGAAGTCAAACACAGATGGGAGAGAAGTTCTTAATCTTGAAACTTACGAAAGAATGTTTCCAAGGGCAAATAGCCACCTGAAGAACCCTAATATTCGGATTGAAGCATCCAGAGATTCAGGAGTTGCAATTATGAATGGCTTAAATCTTGTTGATATGTTCATGGACCCAAACAAGTGGATGGAGCTATTTCCCACAATCATCTCAATGGCAAGAACTATTGAAGTAATATCTTCTGGAATGTTGGGTGGCCATAGTGGCTCTTTGCAATTGATGTATGGAGAGCTGCAAGTGCTTTCACCAGTTGTCCCAACTCGGGAGTTCTACTTCCTGCGTTACTGTCAGCAAATTGAACAAGGTTTATGGGCAATAGTTGATGTTTCTTATGATTTTCCTCAAGATAACCATTTTTCTCCTCAATTTCGATGTCATCGGCTTCCATCTGGATGCTTGATCCAAGACATGCCTAATGGATATTCCAAGGTTATTTGGGTAGAACATGTAGAGATTGAAGACAAAACTCCAATTCATAGGCTCTACAGAAATCTTGTTTACAGTGGGTTGGCATTTGGAGCTGAACGATGGCTTACTACTCTCCAGCGAATGTGTGAAAGATTTGCTTGTCTAATGGTGACAGGCAATTCTACCCGGGATCTTGGAGGAGTGATTCCATCACCGGATGGCAAGAAGAGCATGATGAAACTTGCACAAAGGATGGTCAGCAATTTTTGCGCAAGCGTTAGCACATCAAATGGCCATAGATGGACAACACTCTCTGGGATGAATGAGGTTGGAGTCAGAGTCACTGTCCACAAGAGCAATGATCCTGGCCAACCCAATGGCGTGGTGCTAAGCGCAGCTACTACCATTTGGCTACCCCTTCCTCCTCAGACTGTATTCAATTTCTTCAaggatgaaagaaagagaccTCAGTGGGATGTTCTTTCTAATGGGAATGCTGTGCAAGAGGTTGCTCATATAGCAAATGGGTCACATCCTGGTAACTGCATATCAGTTCTAAGAGCTTTCAACACCAGCCAGAATAACATGCTAATACTCCAAGAGAGCTGCATAGACTCCGCCGGTTCCCTCGTGGTTTATTGCCCTGTTGAGCTGCAATACATCAACATAGCAATGAGTGGTGAAGACCCTTCATACATTCCTCTACTACCATCTGGTTTTTCCATTTCACCTGATGGGCAACCTGAGCAAGGAGTAGGAGACGGAGCTTCCACAAGCTCAAACCCACACAGAAACACAGGAAGGTCTGCAGGTTCACTAGTCACAGTTGCATTTCAGATTCTAGTGAGCAGTTTGCCATCTGCCAAGCTAAACTTGGAGTCGGTGAATACTGTTAATAACCTTATCGGCACCACTGTCCAGCAAATAAAGGCTGCCTTGAATTGTCCTAGTTCCTG 2138 0.4504 MEYGSGGGGSPEDHDGSDSQRRKKRYHRHTAHQIQRLESLFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQHERADNCGLRSENDKIRCENIAMREALKNVICPSCGGPPLNEDSYFDEQKLRLENAHLKEELDRVSSIAAKYMGRPISQLPPVQPIHVSSLDLSMGSFGNQVLGRPSLDLDLLPGSSSSIPNLPYQPPCLSDMDKSLMTDISANAMEELLRLLQTNDPLWMKSNTDGREVLNLETYERMFPRANSHLKNPNIRIEASRDSGVAIMNGLNLVDMFMDPNKWMELFPTIISMARTIEVISSGMLGGHSGSLQLMYGELQVLSPVVPTREFYFLRYCQQIEQGLWAIVDVSYDFPQDNHFSPQFRCHRLPSGCLIQDMPNGYSKVIWVEHVEIEDKTPIHRLYRNLVYSGLAFGAERWLTTLQRMCERFACLMVTGNSTRDLGGVIPSPDGKKSMMKLAQRMVSNFCASVSTSNGHRWTTLSGMNEVGVRVTVHKSNDPGQPNGVVLSAATTIWLPLPPQTVFNFFKDERKRPQWDVLSNGNAVQEVAHIANGSHPGNCISVLRAFNTSQNNMLILQESCIDSAGSLVVYCPVELQYINIAMSGEDPSYIPLLPSGFSISPDGQPEQGVGDGASTSSNPHRNTGRSAGSLVTVAFQILVSSLPSAKLNLESVNTVNNLIGTTVQQIKAALNCPSS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01664 712 Gene3D - 219 445 IPR023393 -
Bva03g01664 712 CDD START_ArGLABRA2_like 215 444 - -
Bva03g01664 712 ProSiteProfiles START domain profile. 211 448 IPR002913 GO:0008289
Bva03g01664 712 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 4 710 IPR042160 -
Bva03g01664 712 SMART HOX_1 21 84 IPR001356 GO:0003677
Bva03g01664 712 Pfam Homeodomain 23 78 IPR001356 GO:0003677
Bva03g01664 712 Gene3D - 10 91 - -
Bva03g01664 712 ProSiteProfiles 'Homeobox' domain profile. 20 80 IPR001356 GO:0003677
Bva03g01664 712 SUPERFAMILY Bet v1-like 212 446 - -
Bva03g01664 712 Pfam START domain 221 445 IPR002913 GO:0008289
Bva03g01664 712 MobiDBLite consensus disorder prediction 638 662 - -
Bva03g01664 712 SUPERFAMILY Homeodomain-like 7 80 IPR009057 -
Bva03g01664 712 ProSitePatterns 'Homeobox' domain signature. 55 78 IPR017970 GO:0000981|GO:0006355
Bva03g01664 712 CDD homeodomain 22 81 IPR001356 GO:0003677
Bva03g01664 712 SUPERFAMILY Bet v1-like 466 704 - -
Bva03g01664 712 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 4 710 - -
Bva03g01664 712 SMART START_1 220 445 IPR002913 GO:0008289
Bva03g01664 712 MobiDBLite consensus disorder prediction 1 29 - -
Bva03g01664 712 MobiDBLite consensus disorder prediction 646 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01664 Bva-Chr3 15118349 15122660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01664 18 712 Homeobox Transcription Factor Family AT1G73360 67.425 0.0 948
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva03g01664 START 1.7e-49 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01664 K09338 - tcc:18587139 1224.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01664 03 15118349 15122660 Bva03g01664 03 15118349 15122660 BWGD