Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01660 ATGGCTCCCGTCGGATTACCACCCGGTTTTAGGTTTCATCCAACCGACGAAGAGCTCGTCAACTATTATCTCAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAGGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGaaaaatcatttttgccAAGTAGAGACCCAGAGTGGTACTTCTTTGGACCTAGGGATAGGAAATACCCTAATGGGTTCAGAACAAACAGAGCAACTCGAGCTGGTTATTGGAAGTCTACTGGGAAGGACAGAAAGGTTACATGCCAAAACAGAGCCATTGGGATGAAGAAGACACTGGTTTATTACAAAGGCAGAGCTCCTCAAGGTGTCAGAACTGACTGGGTAATGCATGAGTATCGCCTAGATGATAAAGATTTCGAAGACACTTCTGGGTTACAGGTAAAGAATCAATGGGATACTTATGCATTGTGCCGTGTGTTCAAGAAAAATGGGTTCAGCTCTGAAGCTGAAGAGCAAGGACAAAGCAGCGGGTGGTCAGTAATTGAGAGCCATCAACCAATGCTTAATGACAGCGAAACGATGTCGCCGGACGTGCCGGGAGCATCATCTTCGTGCTTGGAAGAGGAAGACAAAGATGATTCATGGATGCAATTCATCACAGACGATGATGCATGGTACTCTAATTCTAATGCAGCTACGCTTGGCGCTGAAGAACTCTCTCACGTCACTTTTACAAacta 737 0.4383 MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRKVTCQNRAIGMKKTLVYYKGRAPQGVRTDWVMHEYRLDDKDFEDTSGLQVKNQWDTYALCRVFKKNGFSSEAEEQGQSSGWSVIESHQPMLNDSETMSPDVPGASSSCLEEEDKDDSWMQFITDDDAWYSNSNAATLGAEELSHVTFTN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01660 245 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 245 - -
Bva03g01660 245 ProSiteProfiles NAC domain profile. 6 161 IPR003441 GO:0003677|GO:0006355
Bva03g01660 245 Gene3D NAC domain 15 167 IPR036093 GO:0003677|GO:0006355
Bva03g01660 245 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 245 - -
Bva03g01660 245 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Bva03g01660 245 MobiDBLite consensus disorder prediction 187 206 - -
Bva03g01660 245 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01660 Bva-Chr3 15094959 15098384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01660 1 234 NAC Transcription Factor Family AT3G17730 75.304 1.59e-128 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva03g01660 NAM 2.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01660 - - gmx:100788036 429.098