Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01658 ATGGAGAAAGGCTGGCAAAATGCCGAAGCTGAACCAACCGGTAATGGGAGTGGCTTTGGCTGGGCCTGGGCCCCATTCGACTTGGACCGTTTGGATCGTAATGGTAGCCATTCGAGTCTAACCTCTCCAAAACGGTCAAACACTCGCTATTTGGATCTCGCAACCGTTACTTGTCAGCATCAATTCCGCGTAGACGGATCACAGTTTATGCGGTTTCGAGTCTTCGTCATGGTGAGAAAGAGACGGACTGATGTACCTGGTGGAGGAGAAAGCTCTGAGAGTCATGAGGGTGGTGGTAGTGGCCGTGGTTCTCAGCGCCCTGCTGAAAGAAGTTCTCCACCACAACAGGCAGCAGGGGGTGGATCACAAGGTGGTAGAGGTTGGGGTCCTCAAGGAGGACGTGGGGGTGGAGGTCGTGGTCGTGGGGTGCCGCAGCAGCAGTATGGTGCCCCTGTAGAATATCAAGGTAGGGGGAGGGGAGGGCCTCCTCATCAGGGAGGTCGTGGAGGATATGGTGGTGGAGGATATAGTGGTGGAGGATATGGTGGCGGCCGTGGTGGTGGGGGTGTGGGCAGTGGCCGTGGTTTAGGACCTTCTTATGGTGGACCATCTCGGCCACCAGCTCCCGAACTGCACCAAGCTGCCACGGTTCCATATCATCAAGCTGGAATGACTCCTCAGCCTACATCTGAGGCCAGTTCTTCTTCACAACCTCCCGAGCCATCAAAAGTGGAACAGCAATTTGGGCAGATGACAATTCAGTCAGAACCTGTAGCTCCAGTTGCCCCCTCCTCCAGTAAATCAGTGAGGTTTCCACTCCGGCCAGGAAAAGGTAGCTATGGTATCAAATGCTTAGTCAAGGCTAATCACTTTTTTGCTGAGTTACCCAGCAAGGATCTGCACCAATATGATGTTACCATCACCCCTGAGGTGACTTCCCGAGGTGTGAACCGTGCTGTGATGGAGCAACTTGTGAGACTATACAGGGAGTCATGTCTAGGAAAGAGGCTTCCAGCCTATGATGGACGAAAGAGTTTGTACACTGCCGGGCCACTCCCTTTTATGTCAAAAGAATTTAGGATCACCCTCATTGACGAAGATGATGGATCAGGAGGGCAAAGGAGAGAGAGGGAATTCAAAGTTGTGATAAAATTGGCTGCAAGGGCAGACCTTCATCATTTGGGACTCTTTTTGCAGGGGAAGCAACCTGATGCACCTCAAGAGGCTCTTCAGGTTCTTGACATTGTTCTGCGTGAGCTGCCTACTACTAGGTATTGTCCTGTTGGAAGATCCTTTTATTCACCTGACCTTGGTCGAAGGCAGCCATTAGGTGAGGGATTGGAAAGTTGGCGTGGTTTCTATCAAAGTATTCGTCCAACCCAGATGGGGTTATCTCTCAATATTGACATGTCTTCCACTGCATTCATTGAGCCATTGCCGGTAATTGACTTTGTGACTCAGCTGCTGAACAGAGATGTCTCCTCAAGACCACTTTCTGATGCTGATCGTGTGAAGATCAAAAAAGCTCTTCGAGGTGTAAAAGTGGAAGTTACACACCGTGGCAACATGCGCAGAAAATATCGAATATCTGGTTTAACTTCACAGGCAACAGGAGAACTGACATTCCCTGTTGATGAGAGGGGTACATTGAAGTCTGTTGTGGAGTATTTCTATGAGACATATGGATTTGTCATTCAACATACTCAATGGCCTTGTTTACAAGTGGGCAATCAGCAGAGACCAAACTATCTACCCATGGAGGTTTGCAAGATAGTAGAAGGTCAAAGGTACTCTAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTGAAAGTGACATGCCAGCGTCCAGTTGACAGGGAGAAAGATATTATGCAGACTGTTCGTCACAATGCTTACGACCAAGATCCTTATGCCAAAGAATTTGGAATCAAAATCAGTGAGAAGCTTGCTCAAGTTGAAGCTCGCATTCTTCCTGCACCCTGGCTTAAGTATCATGATACAGGGAGAGAGAAGGATTGCCTACCAGAAGTTGGCCAGTGGAATATGAAGAACAAGAAAATGGTCAATGGTGGTACTGTTAACAACTGGATCTGCATAAATTTTTCAAGGACTATTCAGGATAGTGTGGCTCGTGGGTTTTGCTATGAGCTTGCTCAAATGTGTCATATATCTGGCATGGCATTTAACCCGGAGCCAGTACTTCCCCCACTTAGTGCCCGTCCTGACCAGGTGGATAGGGTCCTGAAGAGTCGTTATCATGATGCCATGACTAAACTGCATGGAAAAGAGCTTGATCttcttattgttattttgcCTGACAATAATGGCTCTCTTTATGGTGACTTGAAACGTATATGTGAGACTGATCTCGGGCTTGTCTCCCAGTGCTGCTTGACTAAACATGTATACAAAATGAGCAAGCAGTACCTTGCTAATGTggctttaaaaattaatgtgaagGTTGGCGGAAGGAACACAGTGCTTGTTGATGCACTTTCCCGTCGCATACCTTTAGTCAGTGATCGGCctactattatttttggaGCTGATGTTACTCATCCACATCCTGGAGAGGATTCAAGTCCATCAATAGCAGCTGTTGTGGCTTCGCAAGATTGGCCTGAAATTACAAAGTACGCTGGTTTGGTTTGTGCTCAAGCACATCGACAGGAGCTCATTCAAGACCTTTTCAAGCAATGGCAGGATCCAGTGAGAGGGACAGTAACTGGTGGAATGATTAaGGAACTTCTCATATCCTTCAGGAGGGCCACAGGGCAGAAGCCGCAGCGCATCATATTTTACAGGGATGGTGTGAGTGAGGGACAGTTCTATCAAGTTTTGCTTTTTGAGCTTGATGCCATTCGGAAGGCTTGTGCATCTCTTGAGCCAAACTATCAACCTCCTGTCACCTTTGTGGTGGTTCAGAAGCGTCATCACACAAGACTTTTTGCCAGCGACCATCATAACAGGAGTTCTGTTGATCGTAGTGGAAATATATTGCCTGGCACGGTGGTAGACTCCAAAATCTGTCATCCTACTGAGTTCGATTTCTATCTTTGTAGTCATGCTGGTATACAGGGCACAAGCCGTCCAGCACATTACCATGTCTTATGGGATGAGAACAATTTCACAGCAGATGCTCTCCAAACCCTCACCAATAACCTTTGCTACACATATGCAAGGTGTACACGTTCTGTTTCAATTGTGCCCCCTGCTTATTATGCTCATCTGGCTGCTTTCCGAGCCCGGTTTTACATGGAACCCGAGACATCTGATAGTGGTTCTATGACTAGTGGTGCTGCTGCTGGACGGggtatgggtggtggtgctgGACGGAGCACTCGTGCACCTGGTGCAATTGCTGCTGTAAGGCCCCTTCCTGCTCTCAAGGAGAATGTCAAGAGGGTTATGTTTTATTGTTA 3425 0.4709 MEKGWQNAEAEPTGNGSGFGWAWAPFDLDRLDRNGSHSSLTSPKRSNTRYLDLATVTCQHQFRVDGSQFMRFRVFVMVRKRRTDVPGGGESSESHEGGGSGRGSQRPAERSSPPQQAAGGGSQGGRGWGPQGGRGGGGRGRGVPQQQYGAPVEYQGRGRGGPPHQGGRGGYGGGGYSGGGYGGGRGGGGVGSGRGLGPSYGGPSRPPAPELHQAATVPYHQAGMTPQPTSEASSSSQPPEPSKVEQQFGQMTIQSEPVAPVAPSSSKSVRFPLRPGKGSYGIKCLVKANHFFAELPSKDLHQYDVTITPEVTSRGVNRAVMEQLVRLYRESCLGKRLPAYDGRKSLYTAGPLPFMSKEFRITLIDEDDGSGGQRREREFKVVIKLAARADLHHLGLFLQGKQPDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATGELTFPVDERGTLKSVVEYFYETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVDREKDIMQTVRHNAYDQDPYAKEFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPEVGQWNMKNKKMVNGGTVNNWICINFSRTIQDSVARGFCYELAQMCHISGMAFNPEPVLPPLSARPDQVDRVLKSRYHDAMTKLHGKELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVYKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASDHHNRSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAAAGRGMGGGAGRSTRAPGAIAAVRPLPALKENVKRVMFYC 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01658 1141 Pfam Piwi domain 768 1087 IPR003165 GO:0003676
Bva03g01658 1141 Pfam Argonaute linker 2 domain 619 665 IPR032472 -
Bva03g01658 1141 Pfam PAZ domain 483 608 IPR003100 GO:0005515
Bva03g01658 1141 Gene3D paz domain 472 597 - -
Bva03g01658 1141 Gene3D - 836 1141 IPR036397 GO:0003676
Bva03g01658 1141 CDD PAZ_argonaute_like 478 592 - -
Bva03g01658 1141 SMART Piwi_a_2 767 1088 IPR003165 GO:0003676
Bva03g01658 1141 ProSiteProfiles PAZ domain profile. 479 593 IPR003100 GO:0005515
Bva03g01658 1141 PANTHER PROTEIN ARGONAUTE 1A 170 1140 - -
Bva03g01658 1141 SUPERFAMILY Ribonuclease H-like 752 1088 IPR012337 -
Bva03g01658 1141 SMART DUF1785_2 426 478 IPR014811 -
Bva03g01658 1141 SUPERFAMILY PAZ domain 285 628 IPR036085 GO:0005515
Bva03g01658 1141 MobiDBLite consensus disorder prediction 105 119 - -
Bva03g01658 1141 Pfam N-terminal domain of argonaute 283 417 IPR032474 -
Bva03g01658 1141 MobiDBLite consensus disorder prediction 83 173 - -
Bva03g01658 1141 Pfam Mid domain of argonaute 676 750 IPR032473 -
Bva03g01658 1141 Pfam Argonaute linker 1 domain 427 477 IPR014811 -
Bva03g01658 1141 ProSiteProfiles Piwi domain profile. 767 1088 IPR003165 GO:0003676
Bva03g01658 1141 MobiDBLite consensus disorder prediction 185 247 - -
Bva03g01658 1141 MobiDBLite consensus disorder prediction 220 247 - -
Bva03g01658 1141 CDD Piwi_ago-like 637 1087 IPR045246 -
Bva03g01658 1141 SMART PAZ_2_a_3 483 615 IPR003100 GO:0005515
Bva03g01658 1141 Gene3D - 657 830 - -
Bva03g01658 1141 Pfam Glycine-rich region of argonaut 149 256 IPR024357 -
Bva03g01658 1141 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 170 1140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01658 Bva-Chr3 15070648 15082268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01658 153 1141 Eukaryotic Initiation Factors Gene Family AT1G48410 81.124 0.0 1627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01658 K11593 - gmx:100780375 1738.01