Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01649 ATGGAAATACTAACGAGGCAATCACACTTGGTGTGCTACATGGAGATTTTTTGGGCCTCCTACATGGAACAAGGTCACGCTGCGCTCTATATTCCCTTTCGCTCTCTTGCTCTCGCGCGCCTTTCCCTGCGTCTCCCCCTTTGCCGCATAACAGTTGCTGGTCACTTTTGTTCGAAAATGTCGGACAATCACGAGACTGATAAGAACATTGAGGTAtggaaaatcaagaaattgatCAAAGCTCTGGAGGCTGCAAGGGGCAATGGAACAAGTATGATTTCCCTTATAATGCCCCCACGTGATCAAATTTCTCGTGTCACCAAGATGCTTGGTGATGAGTTTGGAACTGCATCCAACATAAAAAGCAGGGTCAATAGGCAGTCTGTGCTAGGTGCTATCACTTCTGCTCAGCAGAGGCTTAAGCTTTATAATAAGGTTCCTCCAAACGGGCTTGTTCTTTATACTGGAACAATTGTAACTGAAGATGGGAAGGAAAAGAAGGTGACAATTGATTTTGAACCTTTCAGGGCTATCAATGCATCTCTATACCTTTGTGACAACAAGTTCCACACGGAAGCTCTAAATGAGCTTCTGGAGTCTGATGACAAGTTTGGTTTTATAGTCATGGATGGAAACGGAACTCTTTTTGGGACCTTGAGTGGTAATACAAGAGAGGTCCTTCATAAATTCAGTGTGGATCTCCCAAAGAAACATGGAAGAGGAGGGCAGTCAGCTCTACGGTTTGCTCGTCTTCGCATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCAGAGCTTGCAACGCAGTTTTTTATCAATCCTGCTACCAGTCAGCCCAATGTTTCAGGATTAATTCTGGCTGGTTCAGCTGATTTCAAAACTGAGCTTAGTCAGTCAGATATGTTTGACCCTCGACTTCAGGCAAAAATTCTTAATGTTGTGGATGTATCTTATGGAGGCGAGAATGGCTTCAATCAAGCTATTGAATTATCTTCCGAGATTCTGTCCAATGTGAAGTTCATCCAGGAGAAGAGGTTGATTGGAAAATACTTTGAGGAAATTAGCCAGGATACTGGGAAGTATGTTTTTGGCGTTGAGGATACCCTGAAAGCTCTGGAGATGGGTGCTGTTGAGATACTTATTGTGTGGGAAAATCTGGATATGAATAGGTTTGTCTTAAAAAATAGCAGTACTGGAGAGACTGTTATCAAGCATTTGAACAAGGAAGAAGAGACCAACCAGGACAATTTTCGGGATCCTGCCACCTCTGCTGAACTTGAGGTTCAGGAAAAGATGTCTTTGCTGGAGTGGTTTGCAAATGAGTACAAACGGTTTGGTTGCACTCTTGAGTTCGTCACCAATAAATCACAAGAAGGTTCACAGTTTTGCAGAGGTTTTGGTGGGATAGGAGGGATCCTGCGTTACCAGCTTGATATGAGATCCTTTGATGAGTTTTCTGATGATGGAGAAGTTTACGATGATTCTGAATA 1490 0.4289 MEILTRQSHLVCYMEIFWASYMEQGHAALYIPFRSLALARLSLRLPLCRITVAGHFCSKMSDNHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRAINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVEDTLKALEMGAVEILIVWENLDMNRFVLKNSSTGETVIKHLNKEEETNQDNFRDPATSAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEVYDDSE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01649 496 SUPERFAMILY Translational machinery components 201 335 - -
Bva03g01649 496 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 72 476 IPR004403 GO:0003747|GO:0006415
Bva03g01649 496 Pfam eRF1 domain 3 340 477 IPR005142 -
Bva03g01649 496 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 65 199 IPR024049 -
Bva03g01649 496 SMART eRF1_1_2 63 199 IPR005140 -
Bva03g01649 496 Pfam eRF1 domain 2 203 336 IPR005141 -
Bva03g01649 496 SUPERFAMILY L30e-like 337 479 IPR029064 -
Bva03g01649 496 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 60 496 - -
Bva03g01649 496 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 60 496 IPR004403 GO:0003747|GO:0006415
Bva03g01649 496 Gene3D eRF1 domain 1 54 194 IPR024049 -
Bva03g01649 496 Gene3D eRF1 domain 2 195 336 IPR042226 -
Bva03g01649 496 Gene3D - 338 496 IPR029064 -
Bva03g01649 496 Pfam eRF1 domain 1 77 197 IPR005140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01649 Bva-Chr3 15028558 15031249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01649 60 496 Eukaryotic Initiation Factors Gene Family AT3G26618 89.703 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01649 K03265 - vvi:100248954 828.935