Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01647 ATGAACGAGAAAAACACCGTCTCTAAGGAGCTCAATGCCAAGCACCTCaagATTTTAGAGAATCTACTTAAGCTGCCTGAAAACAGAGAATGTGCAGATTGCCGAAGCAAGGCACCGCGATGGGCAAGCGTGAACTTAGGGATTTTCATATGCATGCAGTGTTCAGGAATTCACCGGAGCCTTGGAGTGCATATATCAAAGGTGCGATCCACTACTTTGGATACATGGTTGGCAGACCAAATTTCTTTCATGCAATATATGGGCAATGGGAAGTCAAATAAGTATTGGGAGGCAGAATTGCCACCAAATTTCGACAGAAATGAATTTGGGCTTGAGAATTTTATACGTGCCAAGTATGTGCAGAAAAGATGGGCAGCAAAAGGTGGATTACTAGCAACTACAAAGTCAAGTGAAATTGTTCGTAACTTAGACGACTTCACTGTTGGTGGAGCCAAGAGTGGTTTCCCAAGAAACAACAGAAGACTTTCTCTGGAGGAAAGTATTCTTACAAAACACATTGCACAAATTCTGCCTCCAGCAGCAAGATCTCGCCAGGGTTCTTTCGATCTGCAAATCAGGTGCCCACCTCCATTAAAGGGACCAACACCTGCAGGTTTTGGCAAGTCTCCAGCCAAGAACAATGGTACAGATGATCTTTCCAAGTTGCATTTCATCCATGAAGATAAACAAGATTTTTCAGCCGCGCTTCCTACAAGCTGGACAACATTTGATTGTAAGACATCAATACTTGTAGACATTCTGAGGTGTCAAGAGTATAAAGTGCACAGAGTTAATGCTCAGCTAAGCCATGGTGTAGATGTCACAAGATTATGGTTGTGGACAACAATGCATGGAtatta 860 0.4267 MNEKNTVSKELNAKHLKILENLLKLPENRECADCRSKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLADQISFMQYMGNGKSNKYWEAELPPNFDRNEFGLENFIRAKYVQKRWAAKGGLLATTKSSEIVRNLDDFTVGGAKSGFPRNNRRLSLEESILTKHIAQILPPAARSRQGSFDLQIRCPPPLKGPTPAGFGKSPAKNNGTDDLSKLHFIHEDKQDFSAALPTSWTTFDCKTSILVDILRCQEYKVHRVNAQLSHGVDVTRLWLWTTMHGY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01647 286 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 138 IPR001164 GO:0005096
Bva03g01647 286 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 250 IPR044520 GO:0005096
Bva03g01647 286 Pfam Putative GTPase activating protein for Arf 18 127 IPR001164 GO:0005096
Bva03g01647 286 SUPERFAMILY ArfGap/RecO-like zinc finger 17 126 IPR037278 -
Bva03g01647 286 SMART arf_gap_3 13 132 IPR001164 GO:0005096
Bva03g01647 286 CDD ArfGap 19 119 - -
Bva03g01647 286 Gene3D Arf GTPase activating protein 1 129 IPR038508 -
Bva03g01647 286 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Bva03g01647 286 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Bva03g01647 286 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Bva03g01647 286 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01647 Bva-Chr3 15003946 15007665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01647 19 133 C2H2 Transcription Factor Family AT3G07940 47.541 3.65e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01647 K12486 - gmx:100803735 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01647 03 15003946 15007665 Bva03g01647 03 15003946 15007665 BWGD