Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01617 ATGCATGAGTTGCTTCAAGATATGGCTAAGGAGATTATCCGCAACGAGTCCCCTAGAGAGCCTGGACAACGTAGTAGAATTTGGTTTCATGAAGATGTTCTCCATATACTAAACGAAAATACGGGAACTGACAACATAGAAGGCATAAAGATAGACTTACCTGAACCAGAAAAGGTGGTGGATCTTGCCAAAGCCTTGGCAAAGATGAAAAAGCTTAGACTTCTTATGGTCTATAATGCACATATTTCAGATGAAATTCACTATCTCTCTGATGAGCTAAGCTGCTGTGAATTCCTCACTGAAATTCCTGACTTCTCAATGGTTCCCAATCTTGAGAGTTTGAACTTGGACAACTGTACAAATTTGTTTAAGGTTCACGAGTCCGTAGGTTCTCTTGATAAGCTTGTAACCTTGAGCCTTCTATTTTGTTCCATTCTCAGGATTCTTCCAAGTTGTTTCAAATTGAGATCTCTTCACACACTTTCCCTTACTGGCTGCTGCAAGCTAAGAAAATTTCCTGGAATTGCTGAGAAAATGGAACATCTAATAGAAATCCTCCTACAAGGGACTGGCATAAAAGAATTACCCGATTCAATTGAACATCTAATTGGACTAAGATATTTATACTTAGAGTTTTGCCAAAAGCTTGAGTATCTCCCCAGTGGCCTTCACAAGTTGCAAGATCTAACTAGTCCCTTTCTCACCGGCTGCTCCAATCTACGAGAGGTTCCAAAGCTTCCCCTAAATATAAGATGCATAGAAGCAAGTGATTGCATATCATTAGAAAGGTTTCCACAGTTATCCAGCCCTTCAAGTTTCACTCCAGAGGATTCTGAAAGATTATATGAGATGAGGAATCTCATTGTGAGGCAGCATTTCCAGGGGGCGAGGTCCCAGATTGGTTTGATTATCATAGCACTAATAGTTCAATTTCTCTTGAAGTGGCTTCTAGGCTGTGCGGTAAGCCTGTGGACTGTTTTTTTGGTGCGGTTGTCGAGTTGGACAAGGCTGCTAAGGCAACTGGTATGCTTCATTGTGGATGTGAGATTGTCATCAGTGATCACAGGACATGGTTTCTA 1079 0.4115 MHELLQDMAKEIIRNESPREPGQRSRIWFHEDVLHILNENTGTDNIEGIKIDLPEPEKVVDLAKALAKMKKLRLLMVYNAHISDEIHYLSDELSCCEFLTEIPDFSMVPNLESLNLDNCTNLFKVHESVGSLDKLVTLSLLFCSILRILPSCFKLRSLHTLSLTGCCKLRKFPGIAEKMEHLIEILLQGTGIKELPDSIEHLIGLRYLYLEFCQKLEYLPSGLHKLQDLTSPFLTGCSNLREVPKLPLNIRCIEASDCISLERFPQLSSPSSFTPEDSERLYEMRNLIVRQHFQGARSQIGLIIIALIVQFLLKWLLGCAVSLWTVFLVRLSSWTRLLRQLVCFIVDVRLSSVITGHGF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01617 359 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 99 204 IPR044974 GO:0006952
Bva03g01617 359 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 99 204 - -
Bva03g01617 359 Gene3D Ribonuclease Inhibitor 37 293 IPR032675 -
Bva03g01617 359 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 94 IPR044974 GO:0006952
Bva03g01617 359 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 94 - -
Bva03g01617 359 SUPERFAMILY L domain-like 65 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01617 Bva-Chr3 14883823 14886406 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01617 56 253 WRKY Transcription Factor Family AT4G12020 36.275 4.22e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01617 - - ccaj:109793662 337.806