Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01608 ATGCATAATCTGGTACAAAAGGTGGGTAGAGACTTTGTTAAACAAGAGTCACCATTAGAGCCCAGCAAGCGAAGtagattattttatgatgAAGATGTTTTGAAAGTGTTCACCAGAAATACTGTATCAGATAAGATTCAAGGCATGTTTGTGGATATCCCAAATGATCCTATAAGCTTGAGTGATAATGCATtccaaaatatgagaaatctcAGAATTCTTATTCTACGGAATGCACAATTTTCTGGAAGCCCTCAACTTCTtccaaataatttaagatttcttGACTGGATGGAATATTCTCCATGTTCAAGGAAAGTTCTACTCTATCCATTAAGTAATCCTCGCCCATTGCCAGAGCCATTTAAGATTTCGACAATGAAATGCTATGAAATTCTTCAACACAAAGAGGGAATCCCTGACGTCTCACTCATCAATTCTGGTTTTCATGGTTCAAATTTGGCCAACGAGAAAGTGGATGGTGCTTTTGGTATCTacggaaaagaagaagaaaaagaaagcaatgatGATTTGAAGGAAGAAGAGCCTTCAACTTCCATCAACCATCAAATCCCTGAAAGCTATGAAACTAAGACTAAATCCAAAGGAAAGGGTGTATTAATACACAACAGCGATGCTGAGGAAATACTGGATTACGAATTGAAAccttgcaaaaaaataaaattggaagaGGATTCTAATATTGTGCAGGTTCAAGCATGTAGAAGTACTGCATCCACTGTGTTGATGGAAAGTAAACGCAACTACTGGGATAAAGCAGATAGAATCCAAATCCAAGTTCCAGAAAAGAGAGCCAATGAAGAATTTAGCCAAATCAAATACAATATGGAAGCATTTTATGCTTCTATTGAAGCAGAGTCCTCTGCACTGCCACTTCCTCAAAACTCAGTGATCAATTGGCCAAGTGAACAAACCCAGAAAAGAGTGCAAGACCTGCAAGACTTGCTATCGAgaagtttctcttttttgttacAACCTAGATGGTCCGAGAATCTGAAAAATGTTCTAGATTACTTGATCAATTTGATGCCAGAAGACGGAATTTCACTAAGGATGAGGGCATTAATGTTGAATCTTTCAAAAAGCTTTAGTCAGTGGAGTTTGGATTACAAGGATGCAAGCCTCAAACTCGAGTCAACGTCTAAGACCCTATCTCACTTTGAGAATCTACAAGTGTGTCTTAAAAGCAACGCGAAGGAATTCAGGGAGGTTGAAAAGTCAGAAATAGAGCTGcagagaatgaaaataatcttTGAGAATGGGGAAAGGATTAAAGCAGAAAGGGATAGTTTGAGGAACAAAGTACCGCGATTGGAAGCTGAGAAGAATGGTGCAAAGATGACCCAAGCTAATATTGAACATGAGTGGTCGAACCTTGTACAACAACTTAGCGTAGCATTTAGCTTTGGGAACTA 1436 0.3538 MHNLVQKVGRDFVKQESPLEPSKRSRLFYDEDVLKVFTRNTVSDKIQGMFVDIPNDPISLSDNAFQNMRNLRILILRNAQFSGSPQLLPNNLRFLDWMEYSPCSRKVLLYPLSNPRPLPEPFKISTMKCYEILQHKEGIPDVSLINSGFHGSNLANEKVDGAFGIYGKEEEKESNDDLKEEEPSTSINHQIPESYETKTKSKGKGVLIHNSDAEEILDYELKPCKKIKLEEDSNIVQVQACRSTASTVLMESKRNYWDKADRIQIQVPEKRANEEFSQIKYNMEAFYASIEAESSALPLPQNSVINWPSEQTQKRVQDLQDLLSRSFSFLLQPRWSENLKNVLDYLINLMPEDGISLRMRALMLNLSKSFSQWSLDYKDASLKLESTSKTLSHFENLQVCLKSNAKEFREVEKSEIELQRMKIIFENGERIKAERDSLRNKVPRLEAEKNGAKMTQANIEHEWSNLVQQLSVAFSFGN 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01608 478 Coils Coil 428 448 - -
Bva03g01608 478 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 101 IPR044974 GO:0006952
Bva03g01608 478 MobiDBLite consensus disorder prediction 170 186 - -
Bva03g01608 478 MobiDBLite consensus disorder prediction 170 202 - -
Bva03g01608 478 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01608 Bva-Chr3 14845562 14847672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01608 1 122 WRKY Transcription Factor Family AT4G12020 34.615 1.40e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01608 - - ahf:112751550 163.31