Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01597 ATGGATCAGGAAGCATCCGAGGGAACTGGGCAACAGGCTTTCAATTTTAAGTGTACAAAGATCCTTCATGGAGTTGATAAACAAATTACATGTCAGACAACAGATAAAACCACCGAACCTTTATCCACTAAATCCAAAGAAGGACAAATCCAGCTGCCTGAGAAATACAGGACCATAGCGGATTTGTTTGATCATATGAGTTGTTCACTGAGGTTACTTAATCTGCGTAAGAAGTCTCCAACTTTTCAAAACATTTGCACTCAGGTTGAAGTTCTGGCCAAAAGaaaattctCTTACCCACATCTTGCTCAGATGAAGTATATACTTCCTGAAGCCATTCATATAGATAAGATACTAGTACATGACAAGAAAAGCTTGTGTATGAAGCCAGATTTAAAGATTACCTTGACATTTGAGGTTGTGGAAGGAAACACTAGCGAATCTGCTTATTTATCTCTCCGCAAACTTTTTGGTTCAAGGCTGATTGATTTCTTCACTAGACGTCCTGAGGCTACCGATGTTCCTGAGGCCATACTACCAGAGCCTTTTAGCCGAAGTACTCCTAGCTTGATTAGTGATAGTGAGGATTTCCCAGTAGATTCTTCAACAGTGCTTTCACAATCTTCAGATGAAATTCAACTTTTGTCAGAGAAATTCCATCCTTATCCCTCTTTTGGGAGGCATTTCTCTCAGAAAAATGTTGCTTCCAGGACAGAAAAGGTCCAATGTCTTTTAGCTCAGACTGCTTTGTTATCTTCTGCATCTGATTGTCTGAATAATGAAGAAAGTGATAGCAGATGGCAAGAAGGATGTACTTTGCATTTGAAATCTGATGCCACGACTAATGAGGATATGGAACAAGGACAGCAGAAGGAATCATGTTCTATGTGTTTTCAACCAAGTGTTATTAATACACCAGCACAGCAGATCTGCCCTCCTCACTCTCTCGGTACCAGTAGTTCAGAAAGCCCTAATATCAGGTTTGCCTCACCCACTGATAGTTTAATGACAGTGACACCTGCGCAGTCAGAATCTAGGAGATTCACATCCAGCTCAGATATTAAAGTGACTACGACCAACCAGAAATCAACTTCATGTTATAAACCTGCAAAAAGAGTTCTTGACTTTTCACACATGGAAGGTGATACTGATGCATTGGATCCTAGTGAAAACAAGTTAGAATCTAGCCGAGTTGTGAATGATAACTTACCTGATGCAAGTCGAGGAGCTTATGTGAGGTGTGAAGGTTCTGTTGTTCTACCCCAGGAGGTAGAAGAGATCCTTGGTTGTTCTCATGAGAAAACCAACCAAAGACATGCTGGTTTAGCAACAGAACGGCAGATTTCTTCATCATTGATTGATCTAGTTGATGTGATTGACTCTGTATTTTGTTCTGTCAAATTCTCTCCAATCACAAAATCAGAATTGCTGCACAAGATACTTATGAATAGTCTTGACTACATTGAGATAAGAGAAGTTGAAGAAAGAGTTGAGATTCTTGAAAAGGTTGTGCCAGATTGGATCTTCAAGAAGTTGGTGCCAACCGGAGATGTTATGTACTGCATCAAGAAAGTATCAGATTTGGACTCAGTTCGATCAAACCTTCGTAGCAATATTACTATGGGAGCTGAATA 1634 0.399 MDQEASEGTGQQAFNFKCTKILHGVDKQITCQTTDKTTEPLSTKSKEGQIQLPEKYRTIADLFDHMSCSLRLLNLRKKSPTFQNICTQVEVLAKRKFSYPHLAQMKYILPEAIHIDKILVHDKKSLCMKPDLKITLTFEVVEGNTSESAYLSLRKLFGSRLIDFFTRRPEATDVPEAILPEPFSRSTPSLISDSEDFPVDSSTVLSQSSDEIQLLSEKFHPYPSFGRHFSQKNVASRTEKVQCLLAQTALLSSASDCLNNEESDSRWQEGCTLHLKSDATTNEDMEQGQQKESCSMCFQPSVINTPAQQICPPHSLGTSSSESPNIRFASPTDSLMTVTPAQSESRRFTSSSDIKVTTTNQKSTSCYKPAKRVLDFSHMEGDTDALDPSENKLESSRVVNDNLPDASRGAYVRCEGSVVLPQEVEEILGCSHEKTNQRHAGLATERQISSSLIDLVDVIDSVFCSVKFSPITKSELLHKILMNSLDYIEIREVEERVEILEKVVPDWIFKKLVPTGDVMYCIKKVSDLDSVRSNLRSNITMGAE 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01597 544 Pfam DNA replication factor CDT1 like 52 117 IPR014939 -
Bva03g01597 544 PANTHER DNA REPLICATION FACTOR CDT1 11 536 IPR045173 GO:0003677|GO:0030174|GO:0071163
Bva03g01597 544 Gene3D - 438 542 IPR038090 -
Bva03g01597 544 CDD Cdt1_m 34 208 IPR014939 -
Bva03g01597 544 PANTHER EXPRESSED PROTEIN 11 536 - -
Bva03g01597 544 Pfam DNA replication factor Cdt1 C-terminal domain 435 508 IPR032054 -
Bva03g01597 544 SUPERFAMILY "Winged helix" DNA-binding domain 47 183 IPR036390 -
Bva03g01597 544 SMART CDT1_2 52 181 IPR014939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01597 Bva-Chr3 14805733 14809623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01597 446 535 Core DNA Replication Machinery Family AT2G31270 36.667 8.13e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01597 K10727 - gmx:102670055 526.939