Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01592 ATGTCATCATCAACCCCTCAAGTCATTACCTGCAAAGcTGCGGTGGCATGGAGAGCTGGAGAGCCATTGGTGATGGAGGAAGTGCAAGTGAGCCCTCCCCAACCCTTGGAGATTAGGATCAAAGTCGTTTGCACCTCTCTCTGTCGCAGTGACCTTTCCGCTTGGGAAACTCAAAACATATTTCCTCGAATATTTGGCCATGAAGCATCGGGGATTGTAGAGAGCGTGGGGCAGGGAGTTACTGAATTTAAACAGGGGGATCATGTGCTAACGGTCTTCATAGGAGAATGCACGACTTGCAGGCAGTGTAAGTCCGGTAAAAGTAACACTTGCCAAGTTTTGGGATTGGAAAGGAAAGGTTTGATGCATAGTGATCAGAGGACACGATTCTTTGTGAATGGGAAGCCTGTTTATCATTATTGTGCGGTTTCAAGTTTCAGTGAATATACAGTAGTCCACTCTGGATGTGCTGTCAAAGTCAGTCCGAATGTACCTCTTGAGAAGATATGCCTTCTGAGCTGTGGAGTTGCTGCAGGTCTGGGTGCAGCATGGAACGTTGCTGCTGTGTCAAAAGGATCGACAGTGGTGATATTTGGCTTAGGAACTGTTGGCCTTTCTGTGGCACAAGGTGCCAAACTTAGGGGTGCATCTCGGATAATTGGTGTGGACAACAATCCTGAGAAGTGTGAGAAAGCTAAAGCTTTTGGAATTGCAGAAGTTATCAACCCAAATTCCTGCAAAGAACCTGTTGTCCAGGTTATCAAGCGCATTACTGATGGCGGGGCAGATTTCTCTTTTGAATGCATAGGTGACACCGATATGATAACCACTGCATTGCAGTCATGCTGTGATGGATGGGGTTTGACTGTTACCCTTGGCGTGCCAAAAGTGAAGCCTGAGATGTCTGCTCATTATGGTCTACTTCTGATGGGAAGAACATTGAAAGGATCTCTATTTGGGGGATGGAAACCTAAATCTGATCTTCCTTCATTAGTAGAGAAATATGTGAACAAGGAAATCCAGATTGATGACTACATAACACATGATTTGCCATTTGAGGATATCAACAGAGCTTTTAGTCTCATGAAGGAAGGAAAATGTCTGCGTTGTGTAATCCACATGCCCAGGTA 1130 0.4531 MSSSTPQVITCKAAVAWRAGEPLVMEEVQVSPPQPLEIRIKVVCTSLCRSDLSAWETQNIFPRIFGHEASGIVESVGQGVTEFKQGDHVLTVFIGECTTCRQCKSGKSNTCQVLGLERKGLMHSDQRTRFFVNGKPVYHYCAVSSFSEYTVVHSGCAVKVSPNVPLEKICLLSCGVAAGLGAAWNVAAVSKGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPEKCEKAKAFGIAEVINPNSCKEPVVQVIKRITDGGADFSFECIGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLLLMGRTLKGSLFGGWKPKSDLPSLVEKYVNKEIQIDDYITHDLPFEDINRAFSLMKEGKCLRCVIHMPR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01592 376 Pfam Zinc-binding dehydrogenase 203 326 IPR013149 -
Bva03g01592 376 Gene3D - 14 369 - -
Bva03g01592 376 PANTHER ALCOHOL DEHYDROGENASE 5 374 - -
Bva03g01592 376 SUPERFAMILY GroES-like 325 373 IPR011032 -
Bva03g01592 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 66 80 IPR002328 GO:0008270|GO:0016491
Bva03g01592 376 Gene3D - 179 317 - -
Bva03g01592 376 Pfam Alcohol dehydrogenase GroES-like domain 37 159 IPR013154 -
Bva03g01592 376 CDD alcohol_DH_plants 9 373 - -
Bva03g01592 376 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 5 374 - -
Bva03g01592 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 338 IPR036291 -
Bva03g01592 376 SUPERFAMILY GroES-like 5 183 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01592 Bva-Chr3 14777755 14781862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01592 37 174 Monolignol Biosynthesis Gene Families AT4G37990 26.056 1.40e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01592 K00001 - gmx:100819938 689.493