Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01588 ATGCACACCATTTTTTATGTTGTCAAACTTATCCCTTCAACGTTGTCTCCAATCATGAGCTTGGCTGGTAACATAAGCCTTTGCTGTCTGATTCTGCAGCTTCTGTCAATTAACAGTGTTGTCTGTGTTGAGATGAAGGAGTTTCATCCAGAAGAAAGAGATGCCTTGTTGCTGCTGAGGGATTCAGTAAGTTCTGATGCTGATTTGCATTCAAACTGGACAGGGCCTCCTTGTATAGTGAATAGGAGTAGATGGAAGGGCATTACCTGTTCTAATTGGCATGTCATTAGCATTGACCTTGAAGGGATTAACGTTGTTGGCTCTTTACCTCCTATGTTTCTGCAAAATATAACTTTCTTGAAGCAACTTAACTTGAGGAGCAATTCAATTTCTGGGATGCTGCCAAACCTTACCAATTTGGTTATCTTGGAACAAGTATTACTGTCTTATAATCATTTCACAGGGCATATTCCAGCAGAGTATGTTGAATTGCCCAGTCTAAGAAGCTTAGAACTGGAGGAGAATTACTTAGAAGGACAAATTCCAGATTTCGATCAGCCATTATTGACAGCCTTCAATGTCTCGTATAATCATCTTAGTGGTCCAATTCCTGAAACTAATGTGCTGCTGAGGTTCCCCAAGAGCTCCTTTGATGATAATTCAGATCTTTGTGGGAAGCCATTAGATAAGTTATGTCCTGCTCCACCACCTGCTCCTTCTTCTGCACCATCGCCTCAGATTATTGCTCCCAGCCCAGGGGAGGAaacgaaaaagaagaaactccAAGTATGGACCATTGCTCTGATTGCTGCTGCAGGAGGACTGCTTCTTTTACTGCTCTGTATTGCTTTCATGTTTTGTAAAAAGCGGAAGCgtggagaagaaaaaacaagaaatgaatCAGCAGCGTACACTTTTGGAGTGTGGGCACAGAAAATGTCTTTTCCAGAGAGAGCTGAAGATTCTGAGAGGTTGGGCCAACTGCAATTTTTTAACAAGGAATTACCAGTTTTTGATTTGGATGATTTATTAAGGGCATCAGCAGAAGTGCTGGGCAAAGGAAATTTAGGCGCTACATATAAAGCAACGCTTGAAACTGGCACCGTTGTTGCAGTGAAGAAACTAGATTCTATGAATGAATTGAGCAAGAGGGAATTCCTCCAGCAGATGCAGTTACTAGGAAAGATAAAGCATGAAAATCTTGTAGAGATTATCTCTTTCTATTACTCAGAGAATGAAAAGTTGGTAATTTATGAGTTTATCTCTGATGGCACTTTGTTTGAGCTATTACATGAGAATAGAGGAGCTGGAAGAGTACCCCTTGATTGGGCTACAAGAATGTCTATTATCAAAGACATAGCAAAGGGTCTTGCTTTCCTTCACAATTCTTTATCATCTCACAAGGGCCTTCATGCCAACCTCAAATCACCCAATGTCCTAATTCATCAACATAGCCAGGGTTGTCATTCCAAGCTCACTGACTTCGGCTTCTTACCACTACTTTCTAGCAGAAAGTGTGCAGAAATGCTAGCCATCAGCAGGTCACCAGAGTTTGCTCAAGGGAAGAGGATCACCCAACAAGCTGATGTCTATTGCTTTGGTATCATTTTACTAGAGATCATAACTGGGAAAGTTCCTGGTGAAACGTTAGGAGAAGACATGGAAGAAGCAACTTCAGATCTTTCAGAGTGGGTAAGAATGGTGGTATACAATGATTGGTCAACTGATATACTGGATATGGAGATTCTAGCCGCAAAAGAAGCGCATGATGCAATGTTGCAGCTTACAGAGTTAGCTCTAGAGTGTACAGACATGACACCAGAGAACCGGCCTAAAATTAACCAAGTATTGAGGAAAATAGAAGAGATAGAGCAAATGAAAGGAGAGAATGACTG 1895 0.4047 MLAISRSPEFAQGKRITQQADVYCFGIILLEIITGKVPGETLGEDMEEATSDLSEWVRMVVYNDWSTDILDMEILAAKEAHDAMLQLTELALECTDMTPENRPKINQVLRKIEEIEQMKGEND 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01588 123 Gene3D Transferase(Phosphotransferase) domain 1 5 123 - -
Bva03g01588 123 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 3 117 - -
Bva03g01588 123 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01588 123 Pfam Protein tyrosine and serine/threonine kinase 7 111 IPR001245 GO:0004672|GO:0006468
Bva03g01588 123 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 117 - -
Bva03g01588 123 SUPERFAMILY Protein kinase-like (PK-like) 6 116 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01588 Bva-Chr3 14760444 14762630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01588 7 118 Receptor kinase-like Gene Family AT5G05160 38.393 5.63e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva03g01588 PK_Tyr_Ser-Thr 7.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01588 - - gmx:100788386 189.119