LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva03g01554	ATGCTTGTGTATGGTAGTACATTTGGGGCAAGAGAGCACTACCCGCATGTAACTTTAGGGGCTTTGGACGCGTCAACACCACTTCCAAAACAAGATGTTGAAATTCATGCTTCATCTTCATGCCTGCAACTATACAGTGTGTGTCTTGAGTTGTCCAACTCTGATTCGACAGTCACTGAAGGTTCATCGATCAATGCTTGGACCCTCAAATTGCAAATCAAGTTCATAAATCAGTTCCCCACCActactattatatatataggtgtGGTTTTGGGCGTGATGCTCAGCAAATCAATATCTGTGAAGCTTTCCAAGATGGCCATGGCTAATTGGGTGACTGTGTTTTTGCTAATGGAGGTGGTGCTGAGTGGTTCTAGATTTGGAGGAGCAGATGGGCTCAACATGAATTATTACTTGATGAGCTGCCCCTTTGTGGAACCTGTTGTGAAGAACATTGTTAATAGAGCTTTGCAGGATGATCCTAGTCTAGCAGCTGGTCTTGTTAGAATGCATTTCCATGACTGCTTCGTAGAGGGATGTGATGGATCAATTTTGATTGACTCAACCAAAGATAACACAGCAGAAAAGGATTCACTAGCAAATCTGAGCTTGAGAGGCTATGAAGTCATCGATGAAATCAAAGAAGAGCTTGAAACACAATGCCCCGGCGTCGTTTCATGTGCTGATATCCTCTCCATGGCAGCCAGAGATGCAGTTTTCTTTGCTGGGGGGCCAGTGTATGACATACCCAAAGGAAGAAAGGATGGAACAAGATCAAAAATTGAGGATACAATCAATCTGCCAGCTCCTTTTCTCAATGCCACTGAGCTCATCAAGTTATTTGGCCAACATGGTTTTTCTGCGCAGGAGATGGTGGCTCTCTCTGGGGCTCATACACTAGGAGTGGCAAGGTGCTCATCTTTCAAGAACCGATTGACCCAAGTGGACCCAACCTTGGACAGTGAATTTGCAAAGACACTCCGAAAAACCTGCAGCGCCGGAGACACGGCGGCGCAGCCCTTCGACGCCACGAGCGACGATTTCGACAACGACTACTACAACGCACTGGTGAGGAAAAACGGCGTGCTTACGTCGGATCAAACGCTGTACGCGAGCCCCAGAACGAGGAACATCGTGAACGCCTATGCTTTGAACCAGGCCATGTTTTTCTTGGACTTTCAACAGGCAATGGTCAAGATGAGCTTGCTTGACGTCAAACAAGGTTCCAAGGGAGAAGTGAGAGAGAATTGCCACAAAATAAATTG	1265	0.4577	MLVYGSTFGAREHYPHVTLGALDASTPLPKQDVEIHASSSCLQLYSVCLELSNSDSTVTEGSSINAWTLKLQIKFINQFPTTTIIYIGVVLGVMLSKSISVKLSKMAMANWVTVFLLMEVVLSGSRFGGADGLNMNYYLMSCPFVEPVVKNIVNRALQDDPSLAAGLVRMHFHDCFVEGCDGSILIDSTKDNTAEKDSLANLSLRGYEVIDEIKEELETQCPGVVSCADILSMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTINLPAPFLNATELIKLFGQHGFSAQEMVALSGAHTLGVARCSSFKNRLTQVDPTLDSEFAKTLRKTCSAGDTAAQPFDATSDDFDNDYYNALVRKNGVLTSDQTLYASPRTRNIVNAYALNQAMFFLDFQQAMVKMSLLDVKQGSKGEVRENCHKIN	421

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva03g01554	421	SUPERFAMILY	Heme-dependent peroxidases	132	421	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Bva03g01554	421	ProSitePatterns	Peroxidases proximal heme-ligand signature.	290	300	IPR019793	-
	Bva03g01554	421	PRINTS	Plant peroxidase signature	289	301	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva03g01554	421	PRINTS	Plant peroxidase signature	142	161	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva03g01554	421	PRINTS	Plant peroxidase signature	205	218	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva03g01554	421	PRINTS	Plant peroxidase signature	243	258	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva03g01554	421	PRINTS	Plant peroxidase signature	224	234	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva03g01554	421	PRINTS	Plant peroxidase signature	339	354	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva03g01554	421	PRINTS	Plant peroxidase signature	355	372	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Bva03g01554	421	PRINTS	Plant peroxidase signature	395	408	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva03g01554	Bva-Chr3	14518382	14522426	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva03g01554	104	421	Peroxidase	AT4G33420	72.013	6.39e-168	474

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva03g01554	K00430		-	gmx:100809245	546.584

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