Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01546 ATGGAGTGCAACAGGGATGAGGCCATCAGAGCTAAAGAGTTTGCTGAGAAAAAGTTCACTGCAAAGGATATTTTGGGTGCAAAGAAGTTTGCTGTGAAGGCCCAGAAATTATTTCCTGGGCTTGAGGGTATTCCTCAGATGATAGCTACACTTGATGTGTATGTTTCTGcagagaatgaaataaatggCGAACCAGATTGGTATGGTATACTTGGTGTTAATCCATGGGCTGATGATGAAACAGTCAGAAGAAACTATAGGAAGCTTGCTCTCTTGCTTCACCCAGATAAGAACAAGTCCATTGGAGCTGATGGGGCATTTAAACTTATTTCAGAGGCATGGAGTTTGCTATCTGATAAGGCTAAAAGGGCAGTGTATGACCagaaaagaaatgcaaaacTACAGAAAGTTTCATCAATGGCTGGAGGTTCATCAGCACAGCCAAAGGCTAACGgaagtttcaattttactaaaaCAACCACATCAAGCGCGAGGGCTCAGAAGAATAGTTCTAAGTCAGCTCACTCTTCAACTTCTACCCATAAGTCAAAATCCAATACGTTTTGGACCTTTTGCAATCAATGCAAAATGCAGTATGAGTATCTCAGAGTTTATCTCAACCTTAAACTCCTGTGCCCCAACTGCCATGAGGCATTTTTGGCTGTAGAAACTGCTCCTCCACCTTCAAGTGATATAAGACCTGCTTCCACGTCCTGGAACTTCTCAAAGCAGCAGAAAATGTCCAATCACCAACCACCTAGTAAAAGCAAATCTAATGTCGGAAAGAACAATACAGCAACCCCGAATGTCAGATTGGGGTGTTATAGTAATACTGAAAGCTATAACCATCCAAGTTTTCAGTGGGGTGCATTCTCAAGAACTTCTGGTATTTCCACTGTGGCTCAAGCGGCAAATGTGGTTCAGCAGGCATATGAGAAAGTGAAGCGAGAACGTGAGGAGGCCCGGGCAGCTACAAAGAGGGAGGAAGCCTTAAGAAAGAAGCAGCGTGCTTCTAAGAGGACTGCTGGTCCTTCGTCTTCAGGGTACTCCAATCCtgcaaagagaagaagaggcATGGATGATACAAGTATGAGTGGCCATGTTAATGAACTTGGAAATCACAAGGGGGTGGGAAATGGAGTAGTAGGAGCAGCTAGCTCGTGTGGATTTCGACAGGGTAGTTTTGAATCAGGCAGAATAAATGGAATCAAGACCACCAGCACAATAGATGTTTCCCAGGTTGAACTTCAGAATCTTCTAATGGAAAAAGCTAGGAAAGAAATTcgcaagaaaataattgaaatcaaGTCAAATCCTGTTGCCTCAAAGATAGTGAAAGTGGAAACTTGTGGAGATGGCTACCAGAAAGCATCTGAGACAGGGGATCAAAATAAGATTGAGAAGTCAGATGATGTAAAGAATGGATCCGATGGCATCAAATGTTATGCAGGTGCTACTGCTGCTAACATGAATGTAGAAACCTTAGAAACAATGTCAATAGATGTCCCAGATTctgattttcatgattttgacAAGGATCGAATTGAAAAATCTTTTGGTGAAAACCAAGTATGGGCTGCGTATGATGACAAAGGTGGTATGCCTCGATATTATGCTATGGTTCATAGCATAGTTTCTCTGGATCCTTTCAAGATACGGATTGGTTGGCTCAACTCAAAGACCAACAGTGAGCTAGGTCCCCTAAACTGGGTTGCTTCAGGCTTTACTAAAACTTGTGGGGATTTCAGAACAGGTAGATATGAAATCAGTAAGTCATTGAATTCTTTTTCTCACAGGGTTCGGTGGAAAAAAGGTACCCATGGGGCCATTTGTATATATCCCAGGAAAGGGGATGTTTGGGCTCTCTATAGGGATTGGTCCCCCGATTGGAATGAGCTAACGCCAGATGAGGTGATACACAAGTATGATATGGTTGAAGTACTTGAGGATTATACTGAAGAAGATGGTGTGATTGTTGTTCCCCTGGTCAAGGTGGCTGGTTTCAAGACAGTATTTCACCGGCACCTAGACCCAAAACAAATCCTGACCATTGCAAGAGAAGAGATGTTTCAATTCTCTCACCAGGTCCCTTCATATTTACTTACTGGTCAAGAAGCTCAAAATGCCCCAAAGGGTTGCAGGGAACTAGACCCAGCAGCCACGCCATCCGAATTTCTGCAGGTGATTGAAGTTGTAAAGGAAGAAGACATGGTAGACAATCTGGATAAGATTATAGAAGAAACAGCAAAGGATTGCATAAAGAATGCTAATGGCGAAGAACTGATTAATGATATGGAAAAATGTAGGGAAGAAAAGGAGGAGAATTTTAAAGATATCTCAGGAGTAGAAGCTTTGGATGAGTTACGAAGAGAAGATTA 2378 0.4075 MECNRDEAIRAKEFAEKKFTAKDILGAKKFAVKAQKLFPGLEGIPQMIATLDVYVSAENEINGEPDWYGILGVNPWADDETVRRNYRKLALLLHPDKNKSIGADGAFKLISEAWSLLSDKAKRAVYDQKRNAKLQKVSSMAGGSSAQPKANGSFNFTKTTTSSARAQKNSSKSAHSSTSTHKSKSNTFWTFCNQCKMQYEYLRVYLNLKLLCPNCHEAFLAVETAPPPSSDIRPASTSWNFSKQQKMSNHQPPSKSKSNVGKNNTATPNVRLGCYSNTESYNHPSFQWGAFSRTSGISTVAQAANVVQQAYEKVKREREEARAATKREEALRKKQRASKRTAGPSSSGYSNPAKRRRGMDDTSMSGHVNELGNHKGVGNGVVGAASSCGFRQGSFESGRINGIKTTSTIDVSQVELQNLLMEKARKEIRKKIIEIKSNPVASKIVKVETCGDGYQKASETGDQNKIEKSDDVKNGSDGIKCYAGATAANMNVETLETMSIDVPDSDFHDFDKDRIEKSFGENQVWAAYDDKGGMPRYYAMVHSIVSLDPFKIRIGWLNSKTNSELGPLNWVASGFTKTCGDFRTGRYEISKSLNSFSHRVRWKKGTHGAICIYPRKGDVWALYRDWSPDWNELTPDEVIHKYDMVEVLEDYTEEDGVIVVPLVKVAGFKTVFHRHLDPKQILTIAREEMFQFSHQVPSYLLTGQEAQNAPKGCRELDPAATPSEFLQVIEVVKEEDMVDNLDKIIEETAKDCIKNANGEELINDMEKCREEKEENFKDISGVEALDELRRED 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01546 792 PANTHER BNAC03G44070D PROTEIN 1 727 - -
Bva03g01546 792 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Bva03g01546 792 SMART dnaj_3 65 122 IPR001623 -
Bva03g01546 792 Coils Coil 300 334 - -
Bva03g01546 792 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
Bva03g01546 792 MobiDBLite consensus disorder prediction 318 366 - -
Bva03g01546 792 PRINTS DnaJ domain signature 122 141 IPR001623 -
Bva03g01546 792 PRINTS DnaJ domain signature 68 86 IPR001623 -
Bva03g01546 792 PRINTS DnaJ domain signature 86 101 IPR001623 -
Bva03g01546 792 PRINTS DnaJ domain signature 102 122 IPR001623 -
Bva03g01546 792 MobiDBLite consensus disorder prediction 137 184 - -
Bva03g01546 792 MobiDBLite consensus disorder prediction 241 271 - -
Bva03g01546 792 Coils Coil 755 775 - -
Bva03g01546 792 Pfam Domain of unknown function (DUF3444) 498 705 IPR024593 -
Bva03g01546 792 CDD DnaJ 66 119 IPR001623 -
Bva03g01546 792 MobiDBLite consensus disorder prediction 318 336 - -
Bva03g01546 792 Gene3D DnaJ domain 63 194 IPR036869 -
Bva03g01546 792 Pfam DnaJ domain 66 127 IPR001623 -
Bva03g01546 792 PANTHER BNAA04G14940D PROTEIN 1 727 - -
Bva03g01546 792 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01546 Bva-Chr3 14475579 14479425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01546 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.483 4.49e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01546 - - pvy:116131251 957.592