Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01534 ATGGGATTTTCAGTACTTGTTCTCTTCTCTATCATAGTTTTCCTCGCTAACCTTATATGGGTATCTGGGAATGCAGAGCTGAGAGCTCTCATGGACATTAAATCCAGTTTGGACCCTGGAAACCACTTTCTGTCCTCTTGGACTGTCAATGGGAACCCGTGTGAGGACTCTTTTGAAGGAGTTGCTTGCAATGATAAGGGTCTGGTGGCAAATATTTCTTTGCAGGGAAAGGGCCTCTATGGCAAGCTCTCTCCAGCCATTGCTGGGCTCAAGCACTTGACAGGGCTTTACTTGCATTACAACTCTTTGAACGGAGAGATACCCAGAGAAATTGCAAACTTGACTGAGTTAAGTGATTTGTATTTAAATGTGAATCACTTATCTGGTGAAATTCCTCCTGAGATCGGGAAAATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAACCAGTTGACGGGAAGTATACCTACACAGCTTGGTTCTCTGAAGAAGCTCAGTGTCCTTGCACTGCAGTCAAACGAACTAACTGGTGCTATCCCTGCTAGTTTAGGTGATCTGGAAATGTTGATTAGGCTCGATTTGAGCTCTAATCACCTCTTTGGTTCCATTCCTACTAGAGTAGCTGATGCTCCTTTACTACAAGTTCTAGATGTTCACAACAATTCTCTCTCTGGGAATGTACCTTCTGCTTTGAAGAGACTAGATGATGGATTCTTGTATGAATACAATCTGGGATTATGTGGAGTTGGGTTTTCATCCTTGAAAACCTGCAATGCTTCTGAACATGACAATCCAAGCAGACCAGAACCTTATGGAGCTGGTGTAAATGGTGCATCAACAAGAGACATCCCAGAAACAGCAGATGTACAACTGCCTTGCAATGGAACTCGGTGCCAGGCTTCGTCGAAATCCAAAGGAACTTCTATTGCTATTGGCATTGTTGTGTTTACAATTGCAGTATCAGCAATTGGTATTTTGACTTTCACATTATATCGTAGGCAAAAACAAAAGCTTGGAAGTTCCTTTGATATCACTGATAGTCGTCTGAGTATTAGTCAGGCCAAGGGGATATACAGGAAGAATGGCTCTCCTTTGGTCAGCCTTGAGTACTCCAATGGATGGGATCCCTTGGCTGATAGTTGCAATTTCAACGGGGACAACCAAGATTTGTTTCAAAGTTTCAGGTTCAACTTGGAAGAGGTGGAGACTGCTACTCAGTATTTCTCTGGGATGAATTTGTTGGGTAAGAGTAACTTCAGTGCAACATATAGAGGGGTCTTAAGAGATGGGTCTGTTGTTGCCATTAAGAGAATCAGTAAAACTAGTTGCAAGTCAGATGAAGGTGAATTTCTGAAGGGATTGAACATTTTGACCTCACTGAGGAATGAGAATTTAGTGAGGTTGAGGGGATTTTGTTGTTCAAGGGGTCGCGGTGAGTGCTTTctgatttatgattttgttaCCAATGGGAATTTGACCCGCTATCTTGATGTGAAAGAAGGTGATGGAGAAGTCCTTGAATGGTCCACAAGAGTTTCTATTGCGAAAGGAATCGCCAAAGGTATAGCATATTTACATTCACACAAGTTGAACAAACCGGCACTTGTTCACCAGAATATCTCAGCTGAGAAAGTGCTTATCGATCAGCGATTCAACCCATTGCTTTCAGATTCTGGCCTGTACAAGCTTCTTACTAATGACATTGTCTTCTCTGAACTTAAAGCAAGTGCAGCAAAGGGCTATCTAGCTCCTGAATACACCACAACTGGCCGGTTCACAGAGAAAAGTGATGTATATGCATTTGGGGTGCTGCTTTTCCAAATCCTCTCAGGGAAGCAGAAGATCACAAGCTCAATGCTCCTTGCTGCAGAATCCTACAGACTCCAAGAACTCATTGACCCAAATCTCCGTGGCAGATTCTTCGAGTATGAGGCAGCTAAGCTGGCAAAAATGGCTTTGCTTTGCTCCCACGAGTCTACATACGAGAGGCCAACCATTGAAGCCATTGTTCAAGAGCTGGGAAATTGCAGCAGCTGTCTCTG 2042 0.43 MGFSVLVLFSIIVFLANLIWVSGNAELRALMDIKSSLDPGNHFLSSWTVNGNPCEDSFEGVACNDKGLVANISLQGKGLYGKLSPAIAGLKHLTGLYLHYNSLNGEIPREIANLTELSDLYLNVNHLSGEIPPEIGKMENLQVLQLCYNQLTGSIPTQLGSLKKLSVLALQSNELTGAIPASLGDLEMLIRLDLSSNHLFGSIPTRVADAPLLQVLDVHNNSLSGNVPSALKRLDDGFLYEYNLGLCGVGFSSLKTCNASEHDNPSRPEPYGAGVNGASTRDIPETADVQLPCNGTRCQASSKSKGTSIAIGIVVFTIAVSAIGILTFTLYRRQKQKLGSSFDITDSRLSISQAKGIYRKNGSPLVSLEYSNGWDPLADSCNFNGDNQDLFQSFRFNLEEVETATQYFSGMNLLGKSNFSATYRGVLRDGSVVAIKRISKTSCKSDEGEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLIYDFVTNGNLTRYLDVKEGDGEVLEWSTRVSIAKGIAKGIAYLHSHKLNKPALVHQNISAEKVLIDQRFNPLLSDSGLYKLLTNDIVFSELKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILSGKQKITSSMLLAAESYRLQELIDPNLRGRFFEYEAAKLAKMALLCSHESTYERPTIEAIVQELGNCSSCL 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01534 680 Gene3D Ribonuclease Inhibitor 25 137 IPR032675 -
Bva03g01534 680 SUPERFAMILY Protein kinase-like (PK-like) 390 673 IPR011009 -
Bva03g01534 680 CDD STKc_IRAK 414 673 - -
Bva03g01534 680 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 678 - -
Bva03g01534 680 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Bva03g01534 680 Gene3D Ribonuclease Inhibitor 142 250 IPR032675 -
Bva03g01534 680 Gene3D Phosphorylase Kinase; domain 1 382 486 - -
Bva03g01534 680 Gene3D Transferase(Phosphotransferase) domain 1 487 679 - -
Bva03g01534 680 SUPERFAMILY L domain-like 26 232 - -
Bva03g01534 680 ProSiteProfiles Protein kinase domain profile. 408 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01534 680 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 3 678 - -
Bva03g01534 680 Pfam Protein tyrosine and serine/threonine kinase 412 673 IPR001245 GO:0004672|GO:0006468
Bva03g01534 680 Pfam Leucine rich repeat 140 199 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01534 Bva-Chr3 14418614 14422051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01534 4 521 Miscellaneous Gene Families AT4G22730 54.924 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Bva03g01534 PK_Tyr_Ser-Thr 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01534 - - gmx:100789253 1123.61