Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01522 ATGGAAAATGGGTTGGTGGTTTTCCATAGGAGCAAGCTCAAACGGGTGTTTCATTCTCAGCACCTTCTTGCAATGGTGGTCGTCTTGCTTATCTCCCCATTGGCTTCAACACTCAGTGAAGAAGGACAAGTTTTGATGGCCATCAAGGCTTCATTCAGCAACGTAGCTGATGTTTTGCTTGATTGGGACGATGTGCACAATGATGACTTCTGTTCTTGGCGTGGAGTCTACTGTGATAATGCCAGCGTTGCTGTGCTTAACCTGAATCTCTCAAGTTTGAATCTTGGTGGGGAGATATCACCTGCCATTGGCGATTTAAGAAACGTGCAGTCCATAGATTTGCAGGGCAATAAACTGACTGGTCAAATTCCAGATGAAATCGGGAACTGTGCTGCTCTTATACATCTGGATTTGTCTGATAATCAGCTATATGGTGATATACCTTTCTCCATATCAAAGCTGAAGcaacttgaatttttGAATTTGAAGAATAATCAGCTTACTGGCCCTATCCCTTCAACCTTAACTCAGATTCCAAATTTGAAAACTCTTGATCTTGCTCAAAATAGACTCATTGGTGAGATACCGAGACTGCTGTATTGGAATGAAGTCTTGCAATACCTGGGGCTGAGAGGTAACTCATTGAGTGGAACTCTGTCTCCTGATATTTGTCAATTAACCGGTCTATGGTACTTTGATGTGAGAAGCAATAACCTGACGGGCGCCATACCGGAAAGCATTGGGAATTGTACTAGTTTTGAAATTCTGGATATATCATATAACCAGATTACTGGGGAAATTCCCTATAATATTGGATTCTTGCAAGTAGCTACTTTATCACTACAAGGAAACAGACTAACTGGCAAGATTCCAGAAGTGATTGGTTTGATGCAGGCCCTTGCcattttGGATTTAAGTGAGAATGAGTTGGTGGGACCTATCCCTCCAATAATAGGCAATTTATCTTTCACTGGCAAACTATACCTTCATGGAAACAAGCTGAGTGGTCCAATACCACCAGAACTGGGCAATATGTCTAAATTAAGCTACCTgcaaTTGAATGATAATCAACTGGTTGGCCAGATTCCTGATGAACTTGGGAAGCTTGAGCATTTGTTTGAATTGAATCTTGCAAACAATCATCTTCAGGGATCTATACCACATAACATTAGCTCCTGCACTGCCTTGAATCAATTCAATGTGCATGGCAATCACTTAAGTGGATCAATTCCTTTGAGCTTCCGTAGCCTTGAGAGTTTGACTTACCTAAACCTCTCCACAAACAACTTCAAAGGAAGTATTCCTAATGAGTTGGGGCATATTATAAATCTTGATACACTgGATCTATCTAGCAATAACTTTTCAGGTCCAGTTCCTGCATCTATTGGTGATCTAGAACATCTTCTGACCTTGAACTTGAGCCACAACCATTTCAATGGTCACTTGCCTGCTGAATTTGGGAATCTGAGAAGCATACAGATTATtGATATGTCATTCAACGATTTATCGGGATGCATCCCTCCAGAGATGGGACAACTGCAGAACCTTGCAACTCTGATTCTGAACAACAATGACCTGCGTGGGAAAATTTCAGATCAGCTAGCAAATTgctttagtctttcttcactGAACGTGTCATACAATAACCTTTCTGGGGTTGTGCCTTCTTTGAAGAACTTCACACGTTTTTCAGCTGACAGCTTCATTGGAAATCCTCTACTATGTGGGAATTGGTTAGGATCAATATGTGGTCCTTATGTTCCAAAATCCAGAGCCATCTTCTCTAGAGCTGCTGTTGTTTGTCTTGTTCTGGGAATCATCACATTATTGGCCATGGTAATTATTGCTGTTTACAGATCCTCCCAATCAAAGCATTTGATAAAAGGCTCTAGCAAAACTGGGCAAGGTCCACCTAAACTCGTGATTCTTCACATGGATATGGCCATTCACACCTTTGATGATATAATGCGAATTACTGAGAACCTTAGCGAGAAATATATCATTGGCTATGGCGCTTCCAGTACAGTGTACAAGTGTACCTGGAAAAATTCCCGACCAATTGCAATTAAGCGACTGTACAACCAGCATCCACACAACCTGCACGAGTTTGAAACAGAACTTGAAACTATTGGCAGCATCAGACATAGAAATCTTGTCTCCTTGCATGGTTATGCACTAACTCCCCATGGGAATCTCCTTTTCTATGACTACATGGAGAATGGCTCTTTATGGGATCTTCTTCATGGTCCTTCAAAGAAGGTTAAACTTCATTGGGAAACACGCTTAAGGATTGCTGTTGGAGCTGCTGAAGGCCTTGCTTATCTTCATCATGACTGTGACCCTCGAATCATTCATAGGGACATAAAGTCCTCAAATATCCTGCTGGATGAGAACTTTGAGGCTCACCTCTCTGATTTTGGCATTGCTAAATGTATCTCAACCTCAAGAACACATGCATCAACGTATGTTCTTGGAACAATCGGCTATATTGACCCTGAGTATGCCCGAACTTCTAGGCTGAATGAAAAATCAGATGTGTATAGCTTCGGCATTGTCCTACTGGAGCTACTTACTGGGAGGAAAGCTGTGGACAACGAATCTAACCTGCATCAATGGATATTGTCTAAGGCTGATAACAATACTGTCATGGAAGCTGTGGATCCGGAGGTCTCTGTTACTTGCATGGATCTTTCTCATGTTAGAAAGACTTTTCAACTTGCTCTTCTTTGCACGAAAAGAAACCCTTCCGAGAGGCCTACCATGCATGAGGTTGCCAGGGTTTTGGTATCACTTCTCCCTGCACCACCGAGCAAAATGTATGCTGCTCCTGCGAAGACCTTTGATTATGCTCAATTTGTGATTGAGAAAGGACAACATGGAAGAATGGAACGGCTACAACCACGGCAGGAGAATAATTCCTCTGATGCTCAATGGTTTGTTCACTTTGGTGATGTTATATCCAACAACACCCTTTA 2975 0.4145 MENGLVVFHRSKLKRVFHSQHLLAMVVVLLISPLASTLSEEGQVLMAIKASFSNVADVLLDWDDVHNDDFCSWRGVYCDNASVAVLNLNLSSLNLGGEISPAIGDLRNVQSIDLQGNKLTGQIPDEIGNCAALIHLDLSDNQLYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLAQNRLIGEIPRLLYWNEVLQYLGLRGNSLSGTLSPDICQLTGLWYFDVRSNNLTGAIPESIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPIIGNLSFTGKLYLHGNKLSGPIPPELGNMSKLSYLQLNDNQLVGQIPDELGKLEHLFELNLANNHLQGSIPHNISSCTALNQFNVHGNHLSGSIPLSFRSLESLTYLNLSTNNFKGSIPNELGHIINLDTLDLSSNNFSGPVPASIGDLEHLLTLNLSHNHFNGHLPAEFGNLRSIQIIDMSFNDLSGCIPPEMGQLQNLATLILNNNDLRGKISDQLANCFSLSSLNVSYNNLSGVVPSLKNFTRFSADSFIGNPLLCGNWLGSICGPYVPKSRAIFSRAAVVCLVLGIITLLAMVIIAVYRSSQSKHLIKGSSKTGQGPPKLVILHMDMAIHTFDDIMRITENLSEKYIIGYGASSTVYKCTWKNSRPIAIKRLYNQHPHNLHEFETELETIGSIRHRNLVSLHGYALTPHGNLLFYDYMENGSLWDLLHGPSKKVKLHWETRLRIAVGAAEGLAYLHHDCDPRIIHRDIKSSNILLDENFEAHLSDFGIAKCISTSRTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGRKAVDNESNLHQWILSKADNNTVMEAVDPEVSVTCMDLSHVRKTFQLALLCTKRNPSERPTMHEVARVLVSLLPAPPSKMYAAPAKTFDYAQFVIEKGQHGRMERLQPRQENNSSDAQWFVHFGDVISNNTL 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01522 991 SUPERFAMILY L domain-like 320 576 - -
Bva03g01522 991 Gene3D Ribonuclease Inhibitor 315 585 IPR032675 -
Bva03g01522 991 SUPERFAMILY Protein kinase-like (PK-like) 639 928 IPR011009 -
Bva03g01522 991 ProSiteProfiles Leucine-rich repeat profile. 180 202 IPR001611 GO:0005515
Bva03g01522 991 Pfam Protein kinase domain 665 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01522 991 Gene3D Phosphorylase Kinase; domain 1 640 737 - -
Bva03g01522 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 29 964 - -
Bva03g01522 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 29 964 - -
Bva03g01522 991 SMART LRR_typ_2 154 177 IPR003591 -
Bva03g01522 991 SMART LRR_typ_2 178 202 IPR003591 -
Bva03g01522 991 SMART LRR_typ_2 465 488 IPR003591 -
Bva03g01522 991 SMART LRR_typ_2 106 130 IPR003591 -
Bva03g01522 991 SMART LRR_typ_2 369 393 IPR003591 -
Bva03g01522 991 SMART LRR_typ_2 513 537 IPR003591 -
Bva03g01522 991 SMART LRR_typ_2 226 250 IPR003591 -
Bva03g01522 991 SMART LRR_typ_2 345 368 IPR003591 -
Bva03g01522 991 SMART LRR_typ_2 417 441 IPR003591 -
Bva03g01522 991 Pfam Leucine rich repeat N-terminal domain 39 79 IPR013210 -
Bva03g01522 991 ProSiteProfiles Protein kinase domain profile. 662 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01522 991 Gene3D Transferase(Phosphotransferase) domain 1 738 939 - -
Bva03g01522 991 SUPERFAMILY L domain-like 38 322 - -
Bva03g01522 991 SMART serkin_6 662 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01522 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Bva03g01522 991 Gene3D Ribonuclease Inhibitor 201 314 IPR032675 -
Bva03g01522 991 Pfam Leucine rich repeat 443 502 IPR001611 GO:0005515
Bva03g01522 991 Pfam Leucine rich repeat 107 167 IPR001611 GO:0005515
Bva03g01522 991 Gene3D Ribonuclease Inhibitor 38 200 IPR032675 -
Bva03g01522 991 ProSitePatterns Protein kinases ATP-binding region signature. 668 690 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01522 Bva-Chr3 14327461 14335081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01522 108 991 Receptor kinase-like Gene Family AT5G07180 78.241 0.0 1400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Bva03g01522 Pkinase 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01522 K20718 - gmx:100811653 1654.03