Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01495 ATGTTTCCTTCATACAAAGGAAATCAGATGGTGATAAAGTTTTCTTCGAGCCCCACCAACCAGCAACACGATGATATCTCTCAAGATTTGGTTCCGGATGATTACGCCTCTCTCGATGCCAGTGTTTCCGACGAAAGATTTGCTCGCAGTGGACCAAAGAAACTCTCTCATGGCTCTGCAAAGAACCATGGTCGCCATTCTGGTgaatacaaaaagaagaagttgatGAATCATAGGGATACCGAGAGGAAAAGAAGGCAAGAAATGGCAACCCTTTACGCCTCCCTTAGATCCCTTCTCCCCTTTGAATTCATCAAGGGAAAGCGTTCTATATCGGAACACATGAACGAGGCAGTGAATTATATAAAGCATTTGCAGAAGAATATCGAAGAACTCACCGGCAAGAGGGATGAACTAAGGAAATTCTACAACTCCAATCCAGAAAACCATGAAAGCAAACGCAATTCTAGCAGCTTTACCATCCATGAGAATAATGGCCGTGTGGAAATTGAAATTGCCAGTGGCTTAGGAGAGGAACCGTTTCGCATTTCAGAATTGCTGGAACTTCTGTTAGAAGAAGGACTTGAAGTTATTAGTTGTCTCTCTAGCAAAGTCAATGGCAGATTGCTTCACAGCCTACGCTGTGAGGTTAAGAATTCCAACAGTGCAAATGAGCCTGAGCTGAGAAGAAAAATTCGCAATGTTATTTCATCCTTTCAATGGTCTGACTA 731 0.4186 MFPSYKGNQMVIKFSSSPTNQQHDDISQDLVPDDYASLDASVSDERFARSGPKKLSHGSAKNHGRHSGEYKKKKLMNHRDTERKRRQEMATLYASLRSLLPFEFIKGKRSISEHMNEAVNYIKHLQKNIEELTGKRDELRKFYNSNPENHESKRNSSSFTIHENNGRVEIEIASGLGEEPFRISELLELLLEEGLEVISCLSSKVNGRLLHSLRCEVKNSNSANEPELRRKIRNVISSFQWSD 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01495 243 MobiDBLite consensus disorder prediction 56 72 - -
Bva03g01495 243 Coils Coil 115 142 - -
Bva03g01495 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 125 IPR011598 GO:0046983
Bva03g01495 243 SMART finulus 79 131 IPR011598 GO:0046983
Bva03g01495 243 MobiDBLite consensus disorder prediction 42 81 - -
Bva03g01495 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 141 IPR036638 GO:0046983
Bva03g01495 243 CDD bHLH_AtORG2_like 74 141 - -
Bva03g01495 243 Pfam Helix-loop-helix DNA-binding domain 76 126 IPR011598 GO:0046983
Bva03g01495 243 Gene3D - 64 156 IPR036638 GO:0046983
Bva03g01495 243 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 241 - -
Bva03g01495 243 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 241 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01495 Bva-Chr3 14157183 14158787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01495 78 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 39.394 2.93e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva03g01495 HLH 1.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01495 - - gmx:100780888 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01495 03 14157183 14158787 Bva03g01495 03 14157183 14158787 ECH