Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01494 ATGCTTCCTTTAAATCAAGGCAATGAGCTGATGATCCAGATTTCTTCGAGCCCCCACCACCAGCAACACAAAATCACAGATCTGATTCTGGATGATTATGGTTTTCTAGATTTCAGTGATTCTGCTAAAAGCGTGGGTGGCAGCCAGCTGAAGAAACTAGTTCATGGGTATCAAAAGAACCATGGTCATCAATATTCTAAcgaaaacaagaagaagaaaatcattcATAAGGAGATTGAGAGGCAAAGAAGGCAACGAATGGCTACCCTATATGCTTCGCTTAGATCCCTTCTTCCCATCGAGTTCAtcaagGGAAAGCGTTCAATATCGGATCACATGAACGAAGCAGTGAATTATATAAACTATTTGAGGAAGAATATCAAAGAACTAAATGCCAAGAAAGATGAACTAAAGAAACTCTCCAATTCCAGTGTGGAAAACCATGAGAGCAATAAAAGTTCTGGTAGCTTTACCATCCATGAGAGTAATGGTGATATTGGAATTGAAATTACAAGTGGGTTCAGAGAGGAAAGTTTCCCCCTATCGAAGTTGCTGAAACTGCTGCCTGAAGAAGGTATTGAAGTTGTTGGTTGCCTTTCGAGTGTAATCAATGGCAGATTACTTCACAGCGTACAGTGTGAGGTTAGCAATTCCAACAGTTTGGATCTACCTGAGCTGAGAAGGAAAATTTATTCCATTATTTA 704 0.3835 MLPLNQGNELMIQISSSPHHQQHKITDLILDDYGFLDFSDSAKSVGGSQLKKLVHGYQKNHGHQYSNENKKKKIIHKEIERQRRQRMATLYASLRSLLPIEFIKGKRSISDHMNEAVNYINYLRKNIKELNAKKDELKKLSNSSVENHESNKSSGSFTIHESNGDIGIEITSGFREESFPLSKLLKLLPEEGIEVVGCLSSVINGRLLHSVQCEVSNSNSLDLPELRRKIYSII 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01494 234 Gene3D - 61 152 IPR036638 GO:0046983
Bva03g01494 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 123 IPR011598 GO:0046983
Bva03g01494 234 CDD bHLH_AtORG2_like 81 142 - -
Bva03g01494 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 138 IPR036638 GO:0046983
Bva03g01494 234 Coils Coil 113 147 - -
Bva03g01494 234 Pfam Helix-loop-helix DNA-binding domain 73 124 IPR011598 GO:0046983
Bva03g01494 234 SMART finulus 77 129 IPR011598 GO:0046983
Bva03g01494 234 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 233 - -
Bva03g01494 234 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 233 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01494 Bva-Chr3 14148452 14149585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01494 67 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25400 48.026 2.10e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva03g01494 HLH 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01494 - - gmx:100780888 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01494 03 14148452 14149585 Bva03g01494 03 14148452 14149585 ECH