Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01493 ATGCTGCCATCTATGCAAATAGATGGGAAGCAAGATCTTTACCATAAATCTTCAAAGGGTCGGCAGAAAAAGCATTTTTCGAGTGAAGATGATGTTCAGAAGAGGCTGAAGCACAGGAagatagaaaaacaaagaaggcaAGAAATGTCTACCCTTTATGCCTCTCTGAGATCTCAACTCCCTCTTGAATACATCAAGGGAAAGCGCTCAGTATCAGATCACATGAATGAAGCTGTCCATTATATCAAGCACTTGAAGAATAGGATCAAGGAACTGAGTGCCAAGAGGGATAAGCTAAGGAAGTTAGCTAACTTGAATGCAACTGAAACAGATGTTACAACCACACGTGCTGATATTCAACCCCCAGCAAGTATTATTGTCCACCACTGTTTTAGTGGGCTTGAGGTTATGCTCAGTGGCAGCCCCATGGCGCAAATGTTGCCTCTATCAAGAGTAATGGATTTGCTGCTCAAAGAAGGCCTTACAGTTATTAACTGTATTTATACCAAAAGAGAACAGAGGTGGAAATACACCATCCATGTAGAGGTTTGTAACCAGACGCTCATTGACTGTCTAGCACTGCaaagaaaacttgaagaaGCAGTCCTTTCTCTATG 617 0.4003 MLPSMQIDGKQDLYHKSSKGRQKKHFSSEDDVQKRLKHRKIEKQRRQEMSTLYASLRSQLPLEYIKGKRSVSDHMNEAVHYIKHLKNRIKELSAKRDKLRKLANLNATETDVTTTRADIQPPASIIVHHCFSGLEVMLSGSPMAQMLPLSRVMDLLLKEGLTVINCIYTKREQRWKYTIHVEVCNQTLIDCLALQRKLEEAVLSL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01493 205 MobiDBLite consensus disorder prediction 23 47 - -
Bva03g01493 205 Gene3D - 24 114 IPR036638 GO:0046983
Bva03g01493 205 PANTHER TRANSCRIPTION FACTOR BHLH120-RELATED 11 203 - -
Bva03g01493 205 CDD bHLH_AtORG2_like 34 109 - -
Bva03g01493 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 31 101 IPR036638 GO:0046983
Bva03g01493 205 MobiDBLite consensus disorder prediction 1 48 - -
Bva03g01493 205 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 203 IPR015660 GO:0003700|GO:0006357
Bva03g01493 205 Pfam Helix-loop-helix DNA-binding domain 34 86 IPR011598 GO:0046983
Bva03g01493 205 Coils Coil 75 102 - -
Bva03g01493 205 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 33 85 IPR011598 GO:0046983
Bva03g01493 205 SMART finulus 39 91 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01493 Bva-Chr3 14140635 14142549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01493 25 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 45.946 9.43e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva03g01493 HLH 1.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01493 - - dzi:111288357 173.711