Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01492 ATGTTTCCTTTTCACCTAAACAATGATTCGCCATTTCAAATATCCTGCGATCTTCAGGAACAGGATACGGTTGATCAACAAGATCTGATTTGGGGCCATGAGTCACTTGAGGGAAGTAATCCTGCCCAGGAAATGGGCAAAGGAAAACAACATATAATATCTCCTACTTCAGAAAATAATGAAGCAAGTGTTCTCAACAATGAGAAGAAGATCACTCGTAGGGACATTGAAAGGGAAAGAAGGATGCAAATGTCCACCCACTGTGCATCTCTTCGATCATTGCTTCCTTTCGAGCTCATCAAGGGAAAGCGTTCTGTCTCAGATCACATAGGTGAGGCTACAAAATATATTCTCTATTTGAAGGAGAAGATCGATGTGCTTCATATAAAGAGAGATAAGCTCAGGCAGATCATGGTTAATCCAAGTATGGTTGATGCTGGCATTGAAAGTTCAAATCGTTCGAGTTTGGTTAATTGTGTCAAGATCGATCCGTTGCCCGGTGGAGTGGAGATTGTTATAGACAGTGGCTTTGAGGAGAGTAGTCCTCCTCTATCACACATTCTAGAAATTTTGCATCAAGAAGGATATAATGTTGTCAGCTGTATCTCCACCAAAGTAAACGGGAGGATAGTACACTCTATCAAGTCTGAGGTGGGCTGTTTAACACACCTTGATCTAGCTGGCATGcaacaaaaactaaataatgctATCTTTCCCTCAAGGTATATATG 731 0.4036 MFPFHLNNDSPFQISCDLQEQDTVDQQDLIWGHESLEGSNPAQEMGKGKQHIISPTSENNEASVLNNEKKITRRDIERERRMQMSTHCASLRSLLPFELIKGKRSVSDHIGEATKYILYLKEKIDVLHIKRDKLRQIMVNPSMVDAGIESSNRSSLVNCVKIDPLPGGVEIVIDSGFEESSPPLSHILEILHQEGYNVVSCISTKVNGRIVHSIKSEVGCLTHLDLAGMQQKLNNAIFPSRYI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01492 243 CDD bHLH_AtORG2_like 69 136 - -
Bva03g01492 243 Gene3D - 61 142 IPR036638 GO:0046983
Bva03g01492 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 67 139 IPR036638 GO:0046983
Bva03g01492 243 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 238 - -
Bva03g01492 243 Pfam Helix-loop-helix DNA-binding domain 69 121 IPR011598 GO:0046983
Bva03g01492 243 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 238 IPR015660 GO:0003700|GO:0006357
Bva03g01492 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 120 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01492 Bva-Chr3 14135247 14136738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01492 74 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 39.053 6.10e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva03g01492 HLH 7.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01492 - - gmx:100776724 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01492 03 14135247 14136738 Bva03g01492 03 14135247 14136738 ECH