Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01491 ATGAATCCTTCATACCCAACTGATGAGTTGGTCTTTCAGATTCGGTCGCCTGACGTTTGTCCCTACCCAATCCAAAAAATCCCAGAAGATCAAATCTTGCATGATCCTCTTACTGATGGCAGTTGTCTTAGCTATAGCAGCCATACAGGGAAGGGAAAGATGCGAACGCTATCGCCTGCTTCTGAAAAAGATGgccacaaaaaaataaaggatgaAAATAAGAAGTGGATGCGCAAGGAAACAGAAAAGCAAAGAAGACAAGAAATGGCCACACTTTGTGCCTCCCTCAGATCTCTATTACCTCTTGAGTATATAAAGGGAAAGCGCTCAAGTTCTGATCACGTGAATGAGGCAGTGAATTATATCAAACATCTAAAGAATAATGTGAAGCAGTTGCAAGCCAAGAGAGACGAGTTAATGAAGTTATCTAATTTGAGCTCTGGAAGTGAAAGCTCAACCACCCATCTTCCCATCTGTGTTACTGTTCATCCCGGTCTGGATGGTGTCGAGATAATGTGCAGTTATAGCTTGAAGAAGCATTCAAATCCACTATCAAGTATATTAGATACAGTGCTAAAAGAAGGGCTTAATGTGGTTAGTTGTACTTCCATCAAAGCAAATGATCAAAGGTTCATACACACTATCCGATCAGAGGTACCATATCAGCTTTATTCAGTAATTAAATGTTCCTGTCGTTCTTA 701 0.3951 MNPSYPTDELVFQIRSPDVCPYPIQKIPEDQILHDPLTDGSCLSYSSHTGKGKMRTLSPASEKDGHKKIKDENKKWMRKETEKQRRQEMATLCASLRSLLPLEYIKGKRSSSDHVNEAVNYIKHLKNNVKQLQAKRDELMKLSNLSSGSESSTTHLPICVTVHPGLDGVEIMCSYSLKKHSNPLSSILDTVLKEGLNVVSCTSIKANDQRFIHTIRSEVPYQLYSVIKCSCRS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01491 233 Coils Coil 115 142 - -
Bva03g01491 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 125 IPR011598 GO:0046983
Bva03g01491 233 Pfam Helix-loop-helix DNA-binding domain 75 126 IPR011598 GO:0046983
Bva03g01491 233 SMART finulus 79 131 IPR011598 GO:0046983
Bva03g01491 233 PANTHER TRANSCRIPTION FACTOR 62 222 - -
Bva03g01491 233 Gene3D - 64 151 IPR036638 GO:0046983
Bva03g01491 233 MobiDBLite consensus disorder prediction 57 83 - -
Bva03g01491 233 CDD bHLH_AtORG2_like 74 142 - -
Bva03g01491 233 MobiDBLite consensus disorder prediction 48 83 - -
Bva03g01491 233 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 62 222 IPR015660 GO:0003700|GO:0006357
Bva03g01491 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 141 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01491 Bva-Chr3 14129520 14130419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01491 71 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25400 46.753 1.14e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva03g01491 HLH 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01491 - - gmx:100803786 246.899