Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01475 ATGGGTAAGGATTGGTGCTGGGCTGCAAGATCCTTCGAGAAAGGTGCAGGAGCTGACACAGAAACCCCTTCAGCTGGTTGCATGTATGCTGTCTTTCAGTTCTTCGATTTCCATCCATTCTTACACCAGCAACAAACCTCTTTCAAACCTGACTCTTGCATCTCTCAGGACTATGCTGTCCCCAAAGGTGCTGTAGCACCTAGGAATAGTTTGGATTCAGAGGACGGTACACTGTCATCCatcttaaaagaagaaaatttcaaacttccaaaAAGCATACAAGTTAAAACAAGTGGAAGCACAAAAGCAAGGGCAGGAAATGCGAGTGATCTTTCCTCAGAAATCAGCAGCTCTCCAGGGGCAAAGACTCCAACTTTGGTAGCCAGATTAATGGGTCTTGATCTCCTTCCAGATGCACACTCACCCTCATCTGCATCACGTCTTTCCACTCCGAATTCACAAGGGAATCCAAGACTTCACCATCTAAGACCTCGGCAATACATCCTAACCAAACCCAGAAACAGTAAAGACAGTGACATTGTAAGTACTCGTTCTCTGCCCGAGAGTCCTAGAATATCCGCTTCAAGAAGATCAGATGTTGATCACCATAGACTATCTCTCCAAATTAACAAGGAAAATATGGGTCTTGGTGAAGAGTTGGAGCTTCCTCGGTTTTCATCACTCACGAAAAGGAAACTGGAAGAGCATAGTAGCAGAAGTCCAAGTCACTATGCCAGGCAAATTGTTAAACAGGTTAAAGAAAGTGTGAGCAGGAAAGTTGGTCTTGACATCACTAACACTGTCAAGAGCAGAGAGCAAGCAAGGGAGGAACTTTTTGGCCAATTGAGAATCAAGAAGTCCTCAAAAGTGTCCTTCAAAGGTCCAGATGAATCTAGCCCAGGGAAGCAGTCAACCCCTTCTCTTTCTCCAAGGCTCAGCAGGTTCGTAGACTCCAACAAGTACAAGCCAAGCACAACAACAACACCAATTACCCCCAAAGATCCAGATTCACAACCTCTAAAATCATCTCCCTCTTCAGCGTTCCATGTTCAGCCACAGTTCACAAGTGTTCTGACTAAGTCAAAACCTAAAGCATTGAAAGCGCAAGAGTTGAAGGTCCAAAAACCAGTGCAAAAGTGTAAGAAGATTGCTAATGAAAGGTTCAATCCGCGACTAAAAAAGCCTACACAGACATCGGATATAATCAGAAACAAGCACGAAGACTCATTTGTTCGTACACCATCACCCACCAGAGCCAATGATATCAAATCTAAAAGCAAGAAAAGTCATCCTTTGTCAAGCAATCTTCTCACTGCCCCTAATCTTCTTCCTGTCAAGACAGACCCCTCTACTGCAGCAACCAAACTACCTCAAATTCAGaaaatgcagtCAATGGTACCTGATACCCAAGAATCGAAATGCACCTCACAGTTATCTAGTTGTTCGCGCCAAACGTACGACCAAGAAGCGACGTGCATGCTCGCCACCCGAGATAGCATTAAAGAGGACATGTCTAACGGTGCCTCCATCACCGGAGCTGAGGCACCAGAATTTCAGTACGTCACGAGTATTCTGAGCCGTACTGGGGTAGAGAAAGGTACGACGGTGTCATTCACTGAatgtttctcttcttcccaACCTTTGGACCCTTCAATTTTTCACCACCTCGAACAGAACCCCACCTCCATTTCCAGTTCTACTTCCTCGAAAGATGTCCAATATAGCATTTTTACGCCGGACAATCAATTGGGTCTCCGTTGTAATCGAAAATTACTGTTTGATTTAGTTGATGAAATTCTGATAGAAATTCTAAGGCCTTACAAGGCATGGGTGGGTGAGGATTTGTTCAATTACAATGGAATGGAAGGGTCGCAATTGATTGAAAGAGTGTGCAAGAAAATTCGAAGCTTTCGAAGCGCGAATTGCCAATTTCTGGAAGACATTGATGCGTTGATTGAAGAAGACATGCCCAAACCGAAGCTCCAAGGAGCAGAGGCattggaagaagaaggagaagggcTAGTAGCAGAGATTGAAGGGAACATATTGGAAACGTTAGTGCATGAGACGGTCATGGCGTGTAGTTGCTCCGTCCGTGCAGGACGGCGTCGTTTGATTAGAGGTGGGACATTGGAGCTTTA 2141 0.4348 MGKDWCWAARSFEKGAGADTETPSAGCMYAVFQFFDFHPFLHQQQTSFKPDSCISQDYAVPKGAVAPRNSLDSEDGTLSSILKEENFKLPKSIQVKTSGSTKARAGNASDLSSEISSSPGAKTPTLVARLMGLDLLPDAHSPSSASRLSTPNSQGNPRLHHLRPRQYILTKPRNSKDSDIVSTRSLPESPRISASRRSDVDHHRLSLQINKENMGLGEELELPRFSSLTKRKLEEHSSRSPSHYARQIVKQVKESVSRKVGLDITNTVKSREQAREELFGQLRIKKSSKVSFKGPDESSPGKQSTPSLSPRLSRFVDSNKYKPSTTTTPITPKDPDSQPLKSSPSSAFHVQPQFTSVLTKSKPKALKAQELKVQKPVQKCKKIANERFNPRLKKPTQTSDIIRNKHEDSFVRTPSPTRANDIKSKSKKSHPLSSNLLTAPNLLPVKTDPSTAATKLPQIQKMQSMVPDTQESKCTSQLSSCSRQTYDQEATCMLATRDSIKEDMSNGASITGAEAPEFQYVTSILSRTGVEKGTTVSFTECFSSSQPLDPSIFHHLEQNPTSISSSTSSKDVQYSIFTPDNQLGLRCNRKLLFDLVDEILIEILRPYKAWVGEDLFNYNGMEGSQLIERVCKKIRSFRSANCQFLEDIDALIEEDMPKPKLQGAEALEEEGEGLVAEIEGNILETLVHETVMACSCSVRAGRRRLIRGGTLEL 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01475 713 MobiDBLite consensus disorder prediction 142 159 - -
Bva03g01475 713 Pfam DUF761-associated sequence motif 112 141 IPR032795 -
Bva03g01475 713 MobiDBLite consensus disorder prediction 97 122 - -
Bva03g01475 713 MobiDBLite consensus disorder prediction 293 351 - -
Bva03g01475 713 MobiDBLite consensus disorder prediction 138 201 - -
Bva03g01475 713 Pfam Domain of unknown function (DUF4378) 517 689 IPR025486 -
Bva03g01475 713 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 698 - -
Bva03g01475 713 MobiDBLite consensus disorder prediction 289 351 - -
Bva03g01475 713 MobiDBLite consensus disorder prediction 429 445 - -
Bva03g01475 713 MobiDBLite consensus disorder prediction 390 445 - -
Bva03g01475 713 MobiDBLite consensus disorder prediction 398 412 - -
Bva03g01475 713 MobiDBLite consensus disorder prediction 171 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01475 Bva-Chr3 14028765 14031733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01475 93 690 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 36.321 1.23e-67 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01475 - - gmx:100795947 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01475 03 14028765 14031733 Bva03g01475 03 14028765 14031733 ECH