Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01472 ATGTTGATATCTAAGCTGACTTTGGATGAAGTTCAAGAGTTAAATAACAACGAAAGTATAAGCTTTTCATCTATTTCTgGATATGGAAGGCTCTATGAGTTCTCAAGCTCCGAcattaaaacaattttggaAAGATACCATGAATATACCAAAACTGCTCATGCAACTAGGACTGACGAGGAAGAATACCTCCAGCAACTGAAGTTTGACACTGCAAGCATGGCAAAGCAGATTGAGATTCTCGAACATTTTCAGAGGAGATTAATGGGATACGGCTTGAATTCGTGCACTTTTGATGAACTCCGGGGACTTGAGAACCAGTTGGAGACGAGTTTGCATAGCATAAGACAGAGAAAGTCACAGCTATATGCGGAGCATCTTGAGCGACTACGAGCCAAGGAGAGGAACAAGGTGGAACAGCATGCAAGGTTAACTGAAATGATGCGGTGTGTTGAAAAACAATCTCAGCAATTGGAAAGACATAAAGAAGTGGAGACTGAACTATTTATTGGATTGCCACACCAGAGCTGCTA 533 0.4034 MLISKLTLDEVQELNNNESISFSSISGYGRLYEFSSSDIKTILERYHEYTKTAHATRTDEEEYLQQLKFDTASMAKQIEILEHFQRRLMGYGLNSCTFDELRGLENQLETSLHSIRQRKSQLYAEHLERLRAKERNKVEQHARLTEMMRCVEKQSQQLERHKEVETELFIGLPHQSC 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01472 177 Coils Coil 124 161 - -
Bva03g01472 177 Pfam K-box region 60 148 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva03g01472 177 ProSiteProfiles K-box domain profile. 64 161 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva03g01472 177 PANTHER MADS BOX PROTEIN 26 173 - -
Bva03g01472 177 PANTHER MADS-BOX PROTEIN SOC1 26 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01472 Bva-Chr3 13987432 13998319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01472 29 172 MADS-box Gene Family AT5G51860 41.892 3.10e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01472 - - gmx:100800580 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01472 03 13987432 13998319 Bva03g01472 03 13987432 13998319 ECH