Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01470 ATGCTAGCCATAGCCAACAGCCAACAGATGAAAGGCCAGTTCATTAGGACTGTTACAAATGTTGGAACACCAAACTCAACCTACCATGTTTCCTTACATGAGATTCCTGATATTTTGCAAGTCACGGTGaaaccttctcttctttctttctctgctaTTAATGAAGAGAAAGTTTTCCTTGTCAAAGTCAGTGGACCAAGTGTATCTGAGTTGCCAATTACATCAGGTTATATCCTTTGGGAAGATGGAAGCATGAGGTTtgaaccaaatccaaattctAAAACATACGGAATCTTTCTAAAGTTTCTGGCATATTTGCCACAGCTACAGAGAGAGCTTCTACCCCATTCTTCTAGTAAATTCTGCACTTCTGGGTTCCGGGAAATTTCTCATTCGTCAGTTCTAGAGTTAAATAACAACGAAAGCATAAGCTTTTCATCTATTTCTgGATATGGAAGGCTCTATGAGTTCTCAAGCTCCGAcattaaaacaattttggaAAGATACCGTGAATATACCAAAACTGCTCATGCAATTAGGACTGACGAGGAAGAATACCTCCAGCAACAGAAGTTTGACACTGCAAGCATGGCAAAGCAGATTGAGATTCTCGAACATTGTCAGAGGAGATTAATGGGATACGGCTTGAATTCGTGCACTTATGATGAACTCCGGGGACTTGAGAACCAGTTGGAGACGAGTTTGCATAGCATAAGACAGAGAAAGTCACAGCTATTTGCGGAGCATCTTGAGCGACTACAAGCCAAGgagAGAAACATGGTGGAAGAGCATGCAAGGTTAACTGAAATGATGCGGTGTGTTGAAAAACAATCTCAGCAATCGGAAAAACATAAAGAAGTGGAGACTGAACTATTTATTGGATTGCCACACCAGAGCTGCTA 902 0.3847 MLAIANSQQMKGQFIRTVTNVGTPNSTYHVSLHEIPDILQVTVKPSLLSFSAINEEKVFLVKVSGPSVSELPITSGYILWEDGSMRFEPNPNSKTYGIFLKFLAYLPQLQRELLPHSSSKFCTSGFREISHSSVLELNNNESISFSSISGYGRLYEFSSSDIKTILERYREYTKTAHAIRTDEEEYLQQQKFDTASMAKQIEILEHCQRRLMGYGLNSCTYDELRGLENQLETSLHSIRQRKSQLFAEHLERLQAKERNMVEEHARLTEMMRCVEKQSQQSEKHKEVETELFIGLPHQSC 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01470 300 Coils Coil 250 270 - -
Bva03g01470 300 PANTHER MADS-BOX PROTEIN SOC1 149 296 - -
Bva03g01470 300 Gene3D - 1 88 - -
Bva03g01470 300 ProSiteProfiles K-box domain profile. 187 277 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bva03g01470 300 PANTHER MADS BOX PROTEIN 149 296 - -
Bva03g01470 300 Pfam Fibronectin type-III domain 5 85 IPR041469 -
Bva03g01470 300 Pfam K-box region 185 271 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01470 Bva-Chr3 13930512 13944425 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01470 149 295 MADS-box Gene Family AT5G51860 40.397 3.62e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01470 - - gmx:100800580 157.532