Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01468 ATGGAGGCGAATCAAAACCAGAGTATCGAGGAAAACGACGAGGATTTCAATGATGAAGAGGAGGCTCATAGTGACGATATGTCCCCTCCCGACACGTCAGTGGCGAACCCGCCGGAGTCGAATTTTCCGGTTCCCCTGAAAGAAGAGTTGACAGACACGGAGCAAAATCAAGATGAGTCTCTGCCCGTTGGTGTTATCCCGTTGAAGATGTCAGCACCGGTCGGAAGAGCGTTGGCACCGGCGAAGAAACCATCGAAGGACCGCCACACGAAGGTGGAAGGCCGTGGCCGGAGAATTCGAATGCCGGCAACGTGCGCCGCCAGAATTTTCCAGCTAACGCGGGAGCTCGGATACAAGTCAGATGGAGAGACAATCAGGTGGTTGCTGGAGCGTGCTGAACCCGCAATCATCGAAGCCACAGGAACCGGCACCATCCCCGCCATCGCTGTCTCTGTTGGGGGAACGCTAAAGATCCCAACTTCATCGCCTGCAAGACCTGCTGGAGAAGAGACTCAGAGGAAACGGAGAAGACGAGCGTCGAACAGTGAGTTCATCGAGATAAATGATGAAAGTTCAACGTCTTCTGGATTAGCTCCTATTGGTCCAATGTCATACGGCGCTATCAGCGCCGCCAGTTGCAGCACCACTAGCGGTGGCGTTACGGGCGCGCAAGGAGGACTAATTCCTTTTTGGCCAATGGGTGCGTCCAATAGTGCTGGGCCTTTCTTCATGTTTCCTAACACTGCCGGCGCCGGTGGAGCTAATCAGCCACAGTATTTTGCAATTCCTGCAACCGCTACTCCATTTTTTAATGTTCAAGCGAGACCCATTTCAAATTTCGTTTCTACTCTGCAAACCAGTGAACAATTGGGGCAGGTTCAAGTTCAACCCTGTGGGTCGGCTTCAAATGGTGCTCCTGGTTCTGCAAATTCATCGTCGACCATGGCTCCTAGCTTGAGCACAGGGACTAGTTCCAGTGTTAGTGTTACTACTAGTGGTTCTAGCACTAGAACAACTCAGATGCTTAGAGATTTCTCTCTGGAAATTTATGACAAGAAAGAGCTCCAATTTTTGGGTCGGTCAGCAAATTCAGAACCACCATGTTCAAAGCCTTG 1115 0.513 MEANQNQSIEENDEDFNDEEEAHSDDMSPPDTSVANPPESNFPVPLKEELTDTEQNQDESLPVGVIPLKMSAPVGRALAPAKKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGYKSDGETIRWLLERAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSPARPAGEETQRKRRRRASNSEFIEINDESSTSSGLAPIGPMSYGAISAASCSTTSGGVTGAQGGLIPFWPMGASNSAGPFFMFPNTAGAGGANQPQYFAIPATATPFFNVQARPISNFVSTLQTSEQLGQVQVQPCGSASNGAPGSANSSSTMAPSLSTGTSSSVSVTTSGSSTRTTQMLRDFSLEIYDKKELQFLGRSANSEPPCSKP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01468 371 MobiDBLite consensus disorder prediction 7 25 - -
Bva03g01468 371 MobiDBLite consensus disorder prediction 168 184 - -
Bva03g01468 371 ProSiteProfiles TCP domain profile. 85 139 IPR017887 -
Bva03g01468 371 MobiDBLite consensus disorder prediction 81 95 - -
Bva03g01468 371 Pfam TCP family transcription factor 85 169 IPR017887 -
Bva03g01468 371 MobiDBLite consensus disorder prediction 296 341 - -
Bva03g01468 371 MobiDBLite consensus disorder prediction 1 64 - -
Bva03g01468 371 MobiDBLite consensus disorder prediction 158 198 - -
Bva03g01468 371 PANTHER TRANSCRIPTION FACTOR TCP9 25 363 - -
Bva03g01468 371 MobiDBLite consensus disorder prediction 76 95 - -
Bva03g01468 371 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 363 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01468 Bva-Chr3 13924527 13926081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01468 73 358 TCP Transcription Factor Family AT5G51910 50.508 4.83e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva03g01468 TCP 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01468 - - pper:18785993 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01468 03 13924527 13926081 Bva04g01090 04 7244003 7246271 ECH
Bva03g01468 03 13924527 13926081 Bva03g01468 03 13924527 13926081 ECH