Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01463 ATGTCTGAGAGTAAAGATGGTGGCGATCATGAAGATGGAGAGGTCAACATGGCTGCTTGGATTCTTGGGGTCAAAAACCTTTCAATTCAGCCATACCCACTTCCTCTTTTAGGTCCCAATGATGTCAAAGTTCGAATCAAAGCAGTAGGCATTTGTGGAAGCGATGTTCATTACTACAAGACAATGAGATGCGCTAACTTTATAGCTGACAAGCCAATGGTGCTGGGACATGAGTGTGCTGGGATCATAGAGCAAGTTGGGAGTGAAGTTAAATCTCTTGCAGTGGGTGATAGAGTAGCATTGGAGCCTGGAATCAGTTGCCAGCGCTGCAATTTCTGCAAAAATGGCCGCTACAATCTGTGTCGCAGCATGAAATTTTTCGGATCTGCTTCAAATAATGGCTCTCTTGCCAATAAGGTGGTGCATCCTGCAAAATTGTGTTTCAAGCTTCCTGAAAATGTGAGCTTGGAGGAAGGGGCCATGTGTGAGCCACTTAGTGTTGGAATACACGCTTGTCGCCGAGCAAATATAGGCGCTGACACAAGTGTGTCGATCATAGGAGCAGGAACAATTGGGCTGGTCGTGTTATTGGCTGCCCGTGCATTTGGTGCCTCAAAGATTGTCATTGCTGATGTTGATGACGGCCGTTTATCCATTGCCAAGGATCTTGGTGCCAATGAGAttgttcaagtttcaaccaGCATCCAGGATTTGGAGCAAGATGTGATGAAGATCCAAAATGCAATGGGTTGTGGGATTGATGTGAGTTTTGATTGTGTGGGCTACAACAAAACCATGTCAACAGCCCTCGATGCTACTTGCCCTGGTGGTAAAGTTTGTCTCGTTGGGTTAGCTCAAACTGAGATGACTGTTCCCCTTACTCTTGCAGCTGTCAgGGAGGTGGATGTAATTGGGATATTCAGGTACAGAGACACTTGGCCACTGTGCATAGAGCTACTGAGGACAGGCAAGATTGACATCAAACCCTTGATAACTCATCGATTTGGATTCTCACAGAAGGAGCTGGAACAAGCTTTTGAAACCAGTGCTCAAGGTGGGAATGCTATTAAGATCATGTTCAATCTCTA 1088 0.4504 MSESKDGGDHEDGEVNMAAWILGVKNLSIQPYPLPLLGPNDVKVRIKAVGICGSDVHYYKTMRCANFIADKPMVLGHECAGIIEQVGSEVKSLAVGDRVALEPGISCQRCNFCKNGRYNLCRSMKFFGSASNNGSLANKVVHPAKLCFKLPENVSLEEGAMCEPLSVGIHACRRANIGADTSVSIIGAGTIGLVVLLAARAFGASKIVIADVDDGRLSIAKDLGANEIVQVSTSIQDLEQDVMKIQNAMGCGIDVSFDCVGYNKTMSTALDATCPGGKVCLVGLAQTEMTVPLTLAAVREVDVIGIFRYRDTWPLCIELLRTGKIDIKPLITHRFGFSQKELEQAFETSAQGGNAIKIMFNL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01463 362 Coils Coil 359 362 - -
Bva03g01463 362 Pfam Zinc-binding dehydrogenase 191 320 IPR013149 -
Bva03g01463 362 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 76 90 IPR002328 GO:0008270|GO:0016491
Bva03g01463 362 SMART PKS_ER_names_mod 23 360 IPR020843 GO:0016491
Bva03g01463 362 CDD sorbitol_DH 18 361 IPR045306 GO:0016616
Bva03g01463 362 PANTHER SORBITOL DEHYDROGENASE 9 362 - -
Bva03g01463 362 Gene3D - 25 349 - -
Bva03g01463 362 Pfam Alcohol dehydrogenase GroES-like domain 39 150 IPR013154 -
Bva03g01463 362 SUPERFAMILY GroES-like 17 189 IPR011032 -
Bva03g01463 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 326 IPR036291 -
Bva03g01463 362 PANTHER L-IDONATE 5-DEHYDROGENASE 9 362 - -
Bva03g01463 362 Gene3D - 167 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01463 Bva-Chr3 13882560 13885207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01463 38 293 Monolignol Biosynthesis Gene Families AT4G39330 26.592 2.48e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01463 K00008 K19635 jre:108998560 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01463 03 13882560 13885207 Bva03g01463 03 13882560 13885207 ECH