Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva03g01463 | ATGTCTGAGAGTAAAGATGGTGGCGATCATGAAGATGGAGAGGTCAACATGGCTGCTTGGATTCTTGGGGTCAAAAACCTTTCAATTCAGCCATACCCACTTCCTCTTTTAGGTCCCAATGATGTCAAAGTTCGAATCAAAGCAGTAGGCATTTGTGGAAGCGATGTTCATTACTACAAGACAATGAGATGCGCTAACTTTATAGCTGACAAGCCAATGGTGCTGGGACATGAGTGTGCTGGGATCATAGAGCAAGTTGGGAGTGAAGTTAAATCTCTTGCAGTGGGTGATAGAGTAGCATTGGAGCCTGGAATCAGTTGCCAGCGCTGCAATTTCTGCAAAAATGGCCGCTACAATCTGTGTCGCAGCATGAAATTTTTCGGATCTGCTTCAAATAATGGCTCTCTTGCCAATAAGGTGGTGCATCCTGCAAAATTGTGTTTCAAGCTTCCTGAAAATGTGAGCTTGGAGGAAGGGGCCATGTGTGAGCCACTTAGTGTTGGAATACACGCTTGTCGCCGAGCAAATATAGGCGCTGACACAAGTGTGTCGATCATAGGAGCAGGAACAATTGGGCTGGTCGTGTTATTGGCTGCCCGTGCATTTGGTGCCTCAAAGATTGTCATTGCTGATGTTGATGACGGCCGTTTATCCATTGCCAAGGATCTTGGTGCCAATGAGAttgttcaagtttcaaccaGCATCCAGGATTTGGAGCAAGATGTGATGAAGATCCAAAATGCAATGGGTTGTGGGATTGATGTGAGTTTTGATTGTGTGGGCTACAACAAAACCATGTCAACAGCCCTCGATGCTACTTGCCCTGGTGGTAAAGTTTGTCTCGTTGGGTTAGCTCAAACTGAGATGACTGTTCCCCTTACTCTTGCAGCTGTCAgGGAGGTGGATGTAATTGGGATATTCAGGTACAGAGACACTTGGCCACTGTGCATAGAGCTACTGAGGACAGGCAAGATTGACATCAAACCCTTGATAACTCATCGATTTGGATTCTCACAGAAGGAGCTGGAACAAGCTTTTGAAACCAGTGCTCAAGGTGGGAATGCTATTAAGATCATGTTCAATCTCTA | 1088 | 0.4504 | MSESKDGGDHEDGEVNMAAWILGVKNLSIQPYPLPLLGPNDVKVRIKAVGICGSDVHYYKTMRCANFIADKPMVLGHECAGIIEQVGSEVKSLAVGDRVALEPGISCQRCNFCKNGRYNLCRSMKFFGSASNNGSLANKVVHPAKLCFKLPENVSLEEGAMCEPLSVGIHACRRANIGADTSVSIIGAGTIGLVVLLAARAFGASKIVIADVDDGRLSIAKDLGANEIVQVSTSIQDLEQDVMKIQNAMGCGIDVSFDCVGYNKTMSTALDATCPGGKVCLVGLAQTEMTVPLTLAAVREVDVIGIFRYRDTWPLCIELLRTGKIDIKPLITHRFGFSQKELEQAFETSAQGGNAIKIMFNL | 362 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva03g01463 | 362 | Coils | Coil | 359 | 362 | - | - | |
Bva03g01463 | 362 | Pfam | Zinc-binding dehydrogenase | 191 | 320 | IPR013149 | - | |
Bva03g01463 | 362 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 76 | 90 | IPR002328 | GO:0008270|GO:0016491 | |
Bva03g01463 | 362 | SMART | PKS_ER_names_mod | 23 | 360 | IPR020843 | GO:0016491 | |
Bva03g01463 | 362 | CDD | sorbitol_DH | 18 | 361 | IPR045306 | GO:0016616 | |
Bva03g01463 | 362 | PANTHER | SORBITOL DEHYDROGENASE | 9 | 362 | - | - | |
Bva03g01463 | 362 | Gene3D | - | 25 | 349 | - | - | |
Bva03g01463 | 362 | Pfam | Alcohol dehydrogenase GroES-like domain | 39 | 150 | IPR013154 | - | |
Bva03g01463 | 362 | SUPERFAMILY | GroES-like | 17 | 189 | IPR011032 | - | |
Bva03g01463 | 362 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 153 | 326 | IPR036291 | - | |
Bva03g01463 | 362 | PANTHER | L-IDONATE 5-DEHYDROGENASE | 9 | 362 | - | - | |
Bva03g01463 | 362 | Gene3D | - | 167 | 307 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva03g01463 | Bva-Chr3 | 13882560 | 13885207 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva03g01463 | 38 | 293 | Monolignol Biosynthesis Gene Families | AT4G39330 | 26.592 | 2.48e-15 | 73.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva03g01463 | K00008 | K19635 | jre:108998560 | 582.793 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva03g01463 | 03 | 13882560 | 13885207 | Bva03g01463 | 03 | 13882560 | 13885207 | ECH |