Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01461 ATGGCTGTTGCCAAGAACAACAGCAGCAGTGAACCTTCAACTTCAAGCATTTGTTACAAGGTAGCAAGCTTGACTGAGACCATATTGGACACAGATCAGACATCGACTTTGAAAGATCGATACATCCTTGGTGAGCAGTTGGGTTGGGGACAGTTTGGCATTATTAGAGCTTGCTCTGACAAGTTGACTGGAGAGATTTTGGCCTGTAAATCAATTGCTAAAGATAAATTGGTTACTTTGGATGATCTGCGGAGTGTCAAGCTTGAGATTGAGATAATGGCTAGGTTATCTGGACACCCAAATGTTGTAGATCTCAAGGCAGTTtatgaagaagaaagttttGTTCACCTGGTGATGGAGCTTTGTGCTGGAGGAGAGCTGTTCCACCGATTAGAGAAGTATGGGCGATTTTCTGAATCTGAGGCCAGGGTTCTTTTTAGGCACCTTATGCAAGTGGTTTTGTATTGTCATGAAAATGGGATTGTTCATAGAGATTTGAAGCCTGAGAATATTCTCTTAGCAACAAGAGCCTCCACATCTCCAATTAAATTGGCAGATTTTGGGCTTGCAACCTACATCAAACCTGGGCAGAGGTTGCATGGGTTAGTTGGCAGTCCATTTTATATAGCTCCAGAGGTACTTGCAGGTGCATATAACCAGACTGCTGATGTTTGGAGTGCTGGGGTTATTCTTTACATTCTACTGAGTGCGATGCCTCCATTTTGGGGGAAGACAAAGTCTCAGATTTTTGACGCTGTTAAGGCAGCTGACCTGAGGTTCCCATCTGAGCCTTGGGATCGCATTTCAGAGTCTGCAAAAGATCTGATTAAGGGAATGCTATGCACAGATCCATCTCAAAGGCTCACTGCTCAGCAGGTTTTAGATCATAGCTGGATGGACAGCAGCCAAACCGATCAAGAACAACTAAGTGAACGTGAAATCCAAAGTAATGGAGAATGGAATGTTGGTGGCAGCTCATTCTCTGCCTCCTTTATGTCCAGGAATCTGGATGTCAGCTTTGGCGCTGGGTCACCCGTTTGTGACGCTCAATCACCTACATTTAGTTGcaaatcatcattttcttcctttttggttGAACCATCAACTCCTTGTTCTGCTACCGGAGGGTTTTCATTTCAGAACTCAGGTGATTCCCCCGGTTTGGAATTCTCATCGCCTGTTCCATCACTGCCTAGCTTTGCATTTCTCAGCCCTGGTTCCGTTGTCGAGCAAAGGAGTTGTACATTAGAGTTTGCAACTGATACATTAAATGTAAATGCAATTGCTGGAAAAGCAGGCTTGGGAAAGTTGCTTCTACTGCCAGATTCTCCTCTTTGTTTGGGACATGATGTTAAAGAAATGGATGGCAAGCCTGCAGAGACTAAAAGGGCTGGTGGAACAAATGTGCATAGAGTATTGGGATTCCACAGCAAGAGAAACCGTACAATCGGACTCGGTGAACGCGAGCAACTCGATCATATGGTGACTGAATCGGTTATCAGGTGGTCGTCGTGCACACAACTTCCCACATCTCTAAGATCATCACTTGTCTGTTA 1556 0.437 MAVAKNNSSSEPSTSSICYKVASLTETILDTDQTSTLKDRYILGEQLGWGQFGIIRACSDKLTGEILACKSIAKDKLVTLDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEESFVHLVMELCAGGELFHRLEKYGRFSESEARVLFRHLMQVVLYCHENGIVHRDLKPENILLATRASTSPIKLADFGLATYIKPGQRLHGLVGSPFYIAPEVLAGAYNQTADVWSAGVILYILLSAMPPFWGKTKSQIFDAVKAADLRFPSEPWDRISESAKDLIKGMLCTDPSQRLTAQQVLDHSWMDSSQTDQEQLSEREIQSNGEWNVGGSSFSASFMSRNLDVSFGAGSPVCDAQSPTFSCKSSFSSFLVEPSTPCSATGGFSFQNSGDSPGLEFSSPVPSLPSFAFLSPGSVVEQRSCTLEFATDTLNVNAIAGKAGLGKLLLLPDSPLCLGHDVKEMDGKPAETKRAGGTNVHRVLGFHSKRNRTIGLGEREQLDHMVTESVIRWSSCTQLPTSLRSSLVC 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01461 518 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Bva03g01461 518 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01461 518 CDD STKc_CAMK 40 298 - -
Bva03g01461 518 Gene3D Transferase(Phosphotransferase) domain 1 128 327 - -
Bva03g01461 518 SUPERFAMILY Protein kinase-like (PK-like) 38 372 IPR011009 -
Bva03g01461 518 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01461 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 511 - -
Bva03g01461 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bva03g01461 518 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Bva03g01461 518 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01461 518 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 34-LIKE 5 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01461 Bva-Chr3 13872109 13876012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01461 24 304 EF-hand Containing Proteins AT3G57530 48.754 5.31e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva03g01461 Pkinase 2.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01461 - - gmx:100776088 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01461 03 13872109 13876012 Bva04g01099 04 7319018 7322807 ECH
Bva03g01461 03 13872109 13876012 Bva03g01461 03 13872109 13876012 ECH