Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01454 ATGGACAATAACCCTCCAAGCCAAAACGTGCCTCAAAACGACACTGCTTCTGATCAGTCTCGTCCTATACAAATTCCCTCTAATCTGCTTGCCACAGCAACTGCATTATCCGAAGAATCTGCGTCTCCTAGACCCGTGGCATCTCCGTCGGGCCAACATGGCAGCCGTCGGCACCCGTTGTACAAGGGAATCCGGTGGCGGAGCGGGAAGTGGGTCTCGGAGATAAGGGAGCCACGTAAAACGACGCGGATTTGGCTGGGAACTTACCCCACCCCGGAAATGGCTGCTGCCGCTTATGATGTTGCGGCTCTTGCATTGAAAGGCCCCGACACGCCCCTCAACTTCGCCAATTCTATTATTTCGTATCCGATTCCGGCGTCATTGTCAGCGACTGATATTCGGAGCGCCGCTGCTGCCGCCGCCGAGGCTAGGCTTGCCAGGGCACCGAAGCAGGGTCCCCCACCTGAGAACCCTCAAAGTTCGTCAAGTGGTTCTTCTCAATACCAAAACTATCCTTTGGCGAGGAGTGAGGAATTCATTGATGAGGATGAGCTGTTGAATATGCCCAGTTTGCTGGATGATATGGCCAGGGGAATGCAGGTTAGCCCACCAAGGATGATCAAGTCGCCGTCGTCGGATGATTCGCCGGGGAATTCCGATGGAGATACCCTTTGGAAttacta 683 0.5403 MDNNPPSQNVPQNDTASDQSRPIQIPSNLLATATALSEESASPRPVASPSGQHGSRRHPLYKGIRWRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTPLNFANSIISYPIPASLSATDIRSAAAAAAEARLARAPKQGPPPENPQSSSSGSSQYQNYPLARSEEFIDEDELLNMPSLLDDMARGMQVSPPRMIKSPSSDDSPGNSDGDTLWNY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01454 227 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 39 227 - -
Bva03g01454 227 MobiDBLite consensus disorder prediction 144 227 - -
Bva03g01454 227 MobiDBLite consensus disorder prediction 1 60 - -
Bva03g01454 227 Gene3D AP2/ERF domain 60 117 IPR036955 GO:0003700|GO:0006355
Bva03g01454 227 CDD AP2 59 118 IPR001471 GO:0003700|GO:0006355
Bva03g01454 227 SUPERFAMILY DNA-binding domain 60 117 IPR016177 GO:0003677
Bva03g01454 227 ProSiteProfiles AP2/ERF domain profile. 51 116 IPR001471 GO:0003700|GO:0006355
Bva03g01454 227 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 39 227 - -
Bva03g01454 227 MobiDBLite consensus disorder prediction 205 227 - -
Bva03g01454 227 MobiDBLite consensus disorder prediction 1 49 - -
Bva03g01454 227 Pfam AP2 domain 59 108 IPR001471 GO:0003700|GO:0006355
Bva03g01454 227 MobiDBLite consensus disorder prediction 157 173 - -
Bva03g01454 227 SMART rav1_2 60 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01454 Bva-Chr3 13828280 13829571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01454 55 227 AP2-EREBP Transcription Factor Family AT5G52020 55.682 7.36e-51 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva03g01454 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01454 - - gmx:100776717 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01454 03 13828280 13829571 Bva04g01104 04 7362647 7364113 ECH
Bva03g01454 03 13828280 13829571 Bva03g01454 03 13828280 13829571 ECH