Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01448 ATGGGACTGAATGAAGCCGGTAATATAGGGCTGGAGACCGGTATAGCAGGTCACTACCACACTGGCATTCCCGCTGGCTCGCGGTTTGGATATCTATCTCACGAATTGTCAGACTTCAGaagaacattaaaattttggcCGCATTTGGTTGCACAGGAGTTTTGCCTGGCTCTGGAGAGCTACTTAGACTCCAGTCACCAAGGGGCGGTGCCCCCCATGGCACCTTCTCGGGTGGCTGGAGGCTTAGCCCAATCATCATCAAGTTCTGGAATATTCTTCCAAGGAGATGGACAGTCACAGAATGTAGTTAACTCTCACTTAAGCTCGTGTTTTGGTAACTCATCTAACTCTATTCCTGGAACTGGGCGCTCAAATCTGGGTCCGGTTTCTGGGGACATGAATAATGCAGTATTAAACAGTGTGGCAAACTCAGGACCAAGTGTTGGAGCGAGTTCTTTAGTCACAGATGCAAACTCTGCGTTTTCTGGAGGCCCTCATTTGCAGAGAAGTGCAAGCATTAATACAGACTCTTACTTGCGTTTGCCAGCATCACCCTTGTCCTTCTCatcaaataatattagtaTTTCAGGGTCATCATTGATGGATGGTTCTTCTGTAGTACAGCAAAGCTCTCAGCAAGATCAGAATATTCAGCAGTTGCAGCAGAATCAGCAGCAGCCACAGGGTGCTTCAAGTGCTACATCTTTGACAGCTCAACAACCTGGGCCGGCTCCACTGCCAATGGGTGCACGTGTACCTGGATCTTTCATTCATGATCCAAATAACATATCCCAGCTGCAGAAGAAACCTCGGCTGGAAATCAAGCAGGAAGATATAATGCAACAGCAGGCCTTGCTTCAGCAGCAGAGAATCAGACAACAGCAGCAACATATTCTTCAATCAATGCCACAGTTACAGCGATCCCAgttgcagcagcagcagcagcaacatcaacaacaacaaatgcACTTCAGGCAACAATTACAACAACCAGCAATACAGCCTGCATCTGCTATTAAGCGTCCATATGAGAGTGGTGGTGTATGTGCCCGTCGACTGATGCAATATCTATATCATCAAAGGCAGCGACCAGCTGATAACAGTATTGCATACTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGAAGCGATGGTGCTTGTCACTATATGATAATGTGGGGCATCATGCTCTTGGTGTTTTTCCACAAGCTGCTATGGATGCATGGCAATGTGACATATGCGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTACTTCCCAGACtcaatgaaatcaaatttggCAGTGGAGTGATTGATGAACTTCTGTTTCTGGAATTGCCTCGTGAATATAGATTTCCTTCTGGAGTAATGTTGTTAGAGTACACAAAAGCGGTTCAAGAAAGTGTATATGAGCAGCTTCGCGTTGTTCGTGAGGGTCATCTTCGGATAATCTTCACGCAAGACCTGAAGATATTATCTTGGGAATTTTGTGCAAGACGCCACGAAGAACTTCTCCCTCGACGATTGGTTGCACCACAGGTAAACCAATTGGTTCAGGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGATCTGATGGGATTTCTCAGCAGGACTTGCAGACAAACAGCAATATGGTGTTGACAGCTGGGCGTCAGCTTGCAAAGAGTTTGGAATTACAGTCTCTAAATGACCTAGGTTTCTCCAAAAGATATGTGAGATGTTTGCAGATCTCTGAGGTTGTCAATAGCATGAAAGATCTGATAGATTTCTGCCGGGACAACAATATTGGAGCAATTGAGGGCTTGAAAAATTATCCTCGACATGCAACTGTGGCCAAGCTACAAATGCAAAAAATGAAGGAGATGGAACAGTTAGCAAGCGTTCAAGGTCTGCCAACTGATAGGAACACACTTAATAAGCTGATGGCGTTGCACCCTGGATTGAACCACCAAATTGACAATAATCATAATATGGTCAATCGTGGTGCTTTAAGTGGATCAGCACAAGCTGCTATGGCACTGACTAACTACCAGAGTCTTCTTATGAGGCAAAACTCCACGAATTCAAATCCTAATTCACTTCAGCGAGAAGCTTCGTCTTCCTTCAATAGTTCCAACCAGTCTCAGCCTCCGACTTTGCCAGGGCCCGCTTCTTTAATTCCAGGGTCCATGCAGAATTCACCTGCCTCTGGTTTCTCAAGTCCCCATCTACCGtcgcagcagcagcagcaacaacagATTCAGCAGCGTTCCTTAGGTGCAAATGGCTTACTGCAACAAAACCACTCTCAGAGCTCCCAACAAAACCATCTCCAACAGCAGATGCTCCAGCAAATGCTGCAGGAGATGTCAAATAGTAGTGGTGGAGTGCAACCTCAAGCTCTCGCTGGGTCCAATGCGTATGGGAACTTGGGAAAGAATGGGTTGGGTTTTGGCGGAAACACCCGAGCAGTAACTGGAGGTACAAGCAATGTTTCGGGCAGTAATGGACCTGTTCCTAGCAGGAGCAACAGTTTCAAAGCTGCTTCGAACAGTGATTCTTCTGCCGCTGGTGGCAACAATGGATTTGACCAGAGAACATCTGATATGCCCCAAAATCTCCGTTTGCAAGAAGATATGGTTCAGGATATTGCCCATGATTTCACAGATAATGGTTTCTTCAGCAGTGATCTGGATGATAACATGGGTTATGGCTGGAAGGCATG 2732 0.4411 MGLNEAGNIGLETGIAGHYHTGIPAGSRFGYLSHELSDFRRTLKFWPHLVAQEFCLALESYLDSSHQGAVPPMAPSRVAGGLAQSSSSSGIFFQGDGQSQNVVNSHLSSCFGNSSNSIPGTGRSNLGPVSGDMNNAVLNSVANSGPSVGASSLVTDANSAFSGGPHLQRSASINTDSYLRLPASPLSFSSNNISISGSSLMDGSSVVQQSSQQDQNIQQLQQNQQQPQGASSATSLTAQQPGPAPLPMGARVPGSFIHDPNNISQLQKKPRLEIKQEDIMQQQALLQQQRIRQQQQHILQSMPQLQRSQLQQQQQQHQQQQMHFRQQLQQPAIQPASAIKRPYESGGVCARRLMQYLYHQRQRPADNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLELPREYRFPSGVMLLEYTKAVQESVYEQLRVVREGHLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCRDNNIGAIEGLKNYPRHATVAKLQMQKMKEMEQLASVQGLPTDRNTLNKLMALHPGLNHQIDNNHNMVNRGALSGSAQAAMALTNYQSLLMRQNSTNSNPNSLQREASSSFNSSNQSQPPTLPGPASLIPGSMQNSPASGFSSPHLPSQQQQQQQIQQRSLGANGLLQQNHSQSSQQNHLQQQMLQQMLQEMSNSSGGVQPQALAGSNAYGNLGKNGLGFGGNTRAVTGGTSNVSGSNGPVPSRSNSFKAASNSDSSAAGGNNGFDQRTSDMPQNLRLQEDMVQDIAHDFTDNGFFSSDLDDNMGYGWKA 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01448 910 MobiDBLite consensus disorder prediction 309 331 - -
Bva03g01448 910 MobiDBLite consensus disorder prediction 199 262 - -
Bva03g01448 910 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 77 223 - -
Bva03g01448 910 MobiDBLite consensus disorder prediction 199 241 - -
Bva03g01448 910 MobiDBLite consensus disorder prediction 829 874 - -
Bva03g01448 910 PANTHER LIM DOMAIN-BINDING PROTEIN 77 223 IPR029005 -
Bva03g01448 910 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 252 283 - -
Bva03g01448 910 MobiDBLite consensus disorder prediction 693 759 - -
Bva03g01448 910 Pfam LIM-domain binding protein 352 611 IPR029005 -
Bva03g01448 910 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 281 909 - -
Bva03g01448 910 PANTHER LIM DOMAIN-BINDING PROTEIN 281 909 IPR029005 -
Bva03g01448 910 PANTHER LIM DOMAIN-BINDING PROTEIN 252 283 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01448 Bva-Chr3 13748185 13755189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01448 341 618 C2H2 Transcription Factor Family AT1G43850 58.273 7.40e-107 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01448 - - pper:18787712 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01448 03 13748185 13755189 Bva04g01111 04 7479254 7486792 ECH
Bva03g01448 03 13748185 13755189 Bva03g01448 03 13748185 13755189 ECH