Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01443 ATGGATGGAGATGATCACCACCCGGGTAGTCCACATGAAGAGAATGTTGACATCAGAACTGAGACATCAAATAACTTGGACTTGAATGTGGAGCAGAACTGTTGTAGCCCAAAACCTCTTCATGTTAATGGCTCTGAATCCAATGGTCCTTCAACAGATGAAAATGGTAGTAATGAAGTCTTAGGAATTGGTACAGAATTTGAATCTGATGAGCATGCATACAGATTCTATAATAAATATGCCAGGTTGATAGGTTTTAGTGTTAGAAAAGATTGGATAAATAGGAGTAAGGTACATGGGCAGGTGGTGTCTAGGAAGTTTACTTGCTCTAGAGAAGGATACCGTAGGAAAGACAAAAGAGATGTCAATGTGAAGAAACATAGGAAGGAAACAAGGACTGGTTGCTTGGCACATATGATCATCACTCGTCAACCAGATGGTAAATATCAGGTCACACAGTTTGAAGGAAAACACAACCATGACAATATAAATCCAAGTAAAGCTCACCTTTCAGCATTGCAAGGTGAATTAGATGTTGCTAAAGTTGCACAAGCTGACTCCAAAGATGATTCCACACCACAGTCAAATGTCGCTTTAGAAATTATGAATAGAAGATTAGCCACCTGTCAATCTCTTGATCAACTTTCCTTGGATTATGACAATTACCTTCCTTTTGAAAGGGGTAGAGATATGAGTGAAGGAGAAGCGGCACATTTGTTGGGTTATTTTCACAGGCAACACTTTGAAAATCCATCATTCTTTTATGCAATACAGCTTGATGTTTATGACAAGATCAGCAATATATTCTGGGCTGATGACAGTATGGTAGCAGATTATGACCATTTTGGTGATGTCATCTGTTTGGACACAACTTGCAGGACAAACAGACAGCTTCGGCCATTTGTACAGTTCATAGGTGTAAATCATCACAAACAAGTGGTGATCTTTGCTGCTGCACTTCTGTATGATGATACTGTTGAATCATTTAATTGGCTATTTCAAACTTTCATGAATGCCATGTCTGGGAAAAAGCCAAAGGTCATTCTCACAGAACAAGAAACTGCAGTTATTGAAGCAATCAATAGAGTTCTACCCGAAACAAGCCATCACGTCTGTGTTTGGCAAATGTATGAAAACACTTTGAAGCATCTAAGCCATGTTGTTAAGGATGTTGATTCTTTTGCCTCTGATCTTCAGAGCAGTATTTATGACCACAAAGATGAGGAGGACTTCACTCGTGCCTGGGAGTCTTTGATGGAGAAGCATGGTCTACAGCAAAACGAATGGCTTAGATGGATGtacagagaaagagagaaatggtCTGTTGTCTTTGAACAGAATACGTTTTTTGTAGACATGAAAGGTTCTCATTTAGGTGAGATtttgtctaaaaaattaagaagttaTCTGAATTCTGACATCGATgtgcttcaattttttaagcaTTTTGAAAGTGTAGTGGATGAGCAACGttttaaagaaatagaagctAATGATGAAATGAGCAGATATTTGCCAAGACTAATGGGTAATGTGATTACATTAAGGCATGCCATTAATTTTTACACTCCAAGAGCATTTGAAGCATTTCAGAGAGGATATGAAATGTCTTTAAATGTTGTTGTCAGCCTAGATAGTAGAAATGGATCAGCGTTTGAGTATAAAGCCAATAAATTCAGGCAAACCAGACAATACAATgtcaaattcttttcttcagaTAATACAGTTATTTGCAGTTGTATGAAGTTTGAACATGTTGGACTTTTGTGTAGCCATGCATTAAGGGTGCTTGATCACAGGAACATCAAAGTGATTCCATCCCAGTATATCCTGAAGAGATGGACAAGAGATGCAAGGTTAGGAAGTATCGGGGAGATTTGTGAATCGAAAATGCAAGATAACCCAAAGATGCTCGTAGCAAGCCGTTACAAAAATTTGTGCCACAAACTACTCAAGTTATCAGCAAGGGCTTCTGAATCCATGGAAGCTTATCAATATGCTGTCCAGAAACTTGATGAAACGATGGATGGAGTGGAGAAAATCTTGACGATGAGAGTTGAGGAAGCTCTAGTTGTTCCCTCCAGTAGCACTGATGCAAATGCTTCAGAAAGTGAGCATGGAGACCTCTTTCTGAATGGGCATGCAATTGAGGAtcagaatgaaaataatgggatgaatgcagaaaaagaaggaagagataCACCTGATGGAggtaatcaaataaatttaagttgtaATGGATCAGATTCAGACAGGATTCTAAGTGCAGAAGTATCTCCACCAAATAATGTCGTCTGCATGCCAAGTCCCTCATCTGCATATGTTTCATCACAGTCCACAGCGCCAAATCCCATTATGCAGGGATTATATAATTTCGAAGCCAGTCAAGTGATTCAGTGCATATATGAACAACCAGCTCTTGTGCTAGGCCACCAATCTAATGCTAACGCGTATCAACCACCAAACTTGTTCTCTAACCAACATGATTCTTCCAGCCAACCCCAAATAATCCAGGAGCCTATGATCCAAAGCACATACCAAGAGTCCATTCCAAGCACTAATCAGATTAGACAGGGTATGGATATTGACATCCAAAATCCACATTCATCTTCATTCTTGCTGTATGATCATAGATA 2636 0.3714 MDGDDHHPGSPHEENVDIRTETSNNLDLNVEQNCCSPKPLHVNGSESNGPSTDENGSNEVLGIGTEFESDEHAYRFYNKYARLIGFSVRKDWINRSKVHGQVVSRKFTCSREGYRRKDKRDVNVKKHRKETRTGCLAHMIITRQPDGKYQVTQFEGKHNHDNINPSKAHLSALQGELDVAKVAQADSKDDSTPQSNVALEIMNRRLATCQSLDQLSLDYDNYLPFERGRDMSEGEAAHLLGYFHRQHFENPSFFYAIQLDVYDKISNIFWADDSMVADYDHFGDVICLDTTCRTNRQLRPFVQFIGVNHHKQVVIFAAALLYDDTVESFNWLFQTFMNAMSGKKPKVILTEQETAVIEAINRVLPETSHHVCVWQMYENTLKHLSHVVKDVDSFASDLQSSIYDHKDEEDFTRAWESLMEKHGLQQNEWLRWMYREREKWSVVFEQNTFFVDMKGSHLGEILSKKLRSYLNSDIDVLQFFKHFESVVDEQRFKEIEANDEMSRYLPRLMGNVITLRHAINFYTPRAFEAFQRGYEMSLNVVVSLDSRNGSAFEYKANKFRQTRQYNVKFFSSDNTVICSCMKFEHVGLLCSHALRVLDHRNIKVIPSQYILKRWTRDARLGSIGEICESKMQDNPKMLVASRYKNLCHKLLKLSARASESMEAYQYAVQKLDETMDGVEKILTMRVEEALVVPSSSTDANASESEHGDLFLNGHAIEDQNENNGMNAEKEGRDTPDGGNQINLSCNGSDSDRILSAEVSPPNNVVCMPSPSSAYVSSQSTAPNPIMQGLYNFEASQVIQCIYEQPALVLGHQSNANAYQPPNLFSNQHDSSSQPQIIQEPMIQSTYQESIPSTNQIRQGMDIDIQNPHSSSFLLYDHR 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01443 878 MobiDBLite consensus disorder prediction 719 746 - -
Bva03g01443 878 MobiDBLite consensus disorder prediction 29 58 - -
Bva03g01443 878 Pfam MULE transposase domain 285 379 IPR018289 -
Bva03g01443 878 Gene3D Hypothetical protein af1432 336 442 - -
Bva03g01443 878 ProSiteProfiles Zinc finger SWIM-type profile. 565 601 IPR007527 GO:0008270
Bva03g01443 878 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 10 747 - -
Bva03g01443 878 SMART 26again6 576 603 IPR006564 GO:0008270
Bva03g01443 878 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 747 IPR031052 GO:0006355
Bva03g01443 878 Pfam FAR1 DNA-binding domain 75 161 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01443 Bva-Chr3 13711591 13715554 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva03g01443 MULE 2.7e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01443 - K17604 gmx:100809803 1234.55