Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01442 ATGGGCTTTCTCAAGCGTCTTTTCGGAGGCAAAAAGCCTGGTAATTCACCCGTCGGGTCGGGTCGTAAGGATAAGAAAAGATGGAGCTTCGCCAAGACCACCGCCAAGGCCACGTCCAACACCGCTCCCCATACTCTCAACGACTTCAACCCCTCTACGTCATCCGCTCCCTTCAGTGAATCCTTAGACGCCAATAAGCATGCCATAGCTGTGGCCGCGGCTACGGCGGCCGTCGCAGAGGCCGCtctagctgccgcacatgccgcAGCAGAGGTAGTCAGACTTACAAGTGGCGGAACCGGCACCGGTGCTAGCAGCAGGCCTGCCTTCTCGGCGCAAGTTACCACCAACCAGCAACGGTGGGCGATGGAGGTCGCCGCCGTTAAGCTTCAATCGGCTTTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCTCTTAAAGCACTGGTGAAGTTGCAAGCATTGGTGAGGGGCCACATAGTAAGAAAACAAACCGCAGACATGCTCAGGCGCATGCAAACGTTGGTACGACTACAAGCCCGGGCACGTGCATCGCGTTCACACTTACCAGATAATTTGCATTCCAGCAAGTCTTCACTATCTTCTCACCCAGTTCCCGAAGATTATGATCACCCACTTCGCACCTACAGTACAAAATTTGATGGGTCTGCTATCCTTAAGAGATGTAGTTCGAATGCAAATTTTAGGGACTTGGACGTAGAGAGAGCTCGTTTTGGTCCGAATTGGTTAGACTGTTGGATGGAAGAAAACGTATGGGACCAACCACGAGATGTTCCATTGAGAAATGGTCACATTGATGATGAGAAGAGTGACAAGATTCTTGAAGTAGATACATGGAAGCCACACTTGAACTCCAACCGCAGTAGCAGTTCTTATTATATGGCTTCTGATTatcataatgataattttacaaGATATGACTCTCCATCAAAACGATCAACAAAAGACCCCTTTAGTCTGAGCTCATTGAAGTTGCAGAGAGGAAAAGATGAAGTTGTTGCTTCAAGAACTGCTGAGAACAGTCCACAGGCATTTTCTTCGTCTTCTAGGCCTGGAACTGGAGCTAGGAAAGGTCCCTTTACGCCCACGAGGAGTGAATGTTCATGGGGCTTCTTCAATGGCTATTCAGGTTACCCCAATTACATGGCAACCACTGAATCTTCCAAGGCTAAGGTGAGATCACAGAGTGCCCCAAAGCAAAGGTTGGAGTTTGAGAAATATGGTTCAACCAGGAGATATGTGCAGCAGGGTCTTTGGATATA 1283 0.4786 MGFLKRLFGGKKPGNSPVGSGRKDKKRWSFAKTTAKATSNTAPHTLNDFNPSTSSAPFSESLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGTGTGASSRPAFSAQVTTNQQRWAMEVAAVKLQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQARARASRSHLPDNLHSSKSSLSSHPVPEDYDHPLRTYSTKFDGSAILKRCSSNANFRDLDVERARFGPNWLDCWMEENVWDQPRDVPLRNGHIDDEKSDKILEVDTWKPHLNSNRSSSSYYMASDYHNDNFTRYDSPSKRSTKDPFSLSSLKLQRGKDEVVASRTAENSPQAFSSSSRPGTGARKGPFTPTRSECSWGFFNGYSGYPNYMATTESSKAKVRSQSAPKQRLEFEKYGSTRRYVQQGLWI 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01442 427 Pfam Protein of unknown function (DUF4005) 349 410 IPR025064 -
Bva03g01442 427 SMART iq_5 145 166 IPR000048 GO:0005515
Bva03g01442 427 SMART iq_5 122 144 IPR000048 GO:0005515
Bva03g01442 427 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
Bva03g01442 427 MobiDBLite consensus disorder prediction 8 27 - -
Bva03g01442 427 PANTHER CALMODULIN-BINDING PROTEIN 1 423 - -
Bva03g01442 427 MobiDBLite consensus disorder prediction 336 368 - -
Bva03g01442 427 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Bva03g01442 427 Pfam IQ calmodulin-binding motif 126 144 IPR000048 GO:0005515
Bva03g01442 427 Gene3D - 122 174 - -
Bva03g01442 427 ProSiteProfiles IQ motif profile. 123 151 IPR000048 GO:0005515
Bva03g01442 427 MobiDBLite consensus disorder prediction 186 208 - -
Bva03g01442 427 MobiDBLite consensus disorder prediction 189 203 - -
Bva03g01442 427 MobiDBLite consensus disorder prediction 343 361 - -
Bva03g01442 427 PANTHER IQ-DOMAIN 5-RELATED 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01442 Bva-Chr3 13706437 13710190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01442 1 426 IQD Protein Family AT5G62070 48.260 1.00e-69 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01442 - - gmx:100785181 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01442 03 13706437 13710190 Bva03g01442 03 13706437 13710190 ECH