Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01435 ATGGCGTTCAATCTTCTCTTTTGCTACCTCTTCGTTTTCCAGCTCGCTACCGCCTTTGTACACCAGAATGAAGAAACCTCAGAAAAAAACTCTCTCCTTTCGTTCAAAACCAGCCTCGAAAACCCCCGTTTTCTTGCTTCATGGAACCCATCAACCCCTCACTGCAGCTGGGTCGGCGTTACTTGCCAACTCGGTCGAGTCACCTCGCTTTCTCTTGCTACTCGTTCCCTCAATGGTCCTCTCTCTTCTTCCCTCTTCTCCCTTTCCAGCCTGACTGTCCTCAACTTGTCCTCGAACGCTCTCTTCGGTGAGATACCTTCACAGATAGCTCATTTGCGAAACTTGAAGGAGCTCAGTCTTAGTGATAATCAGTTTTCTGGGGAAATTCCTAGGGAGCTTGGTGAGTTAATTCACTTGGAAACTCTCAAACTCGGTTCCAACTTGTTCACCGGAAAAATCCCACCGGAGCTGGGGCTGTTGACAGAACTCCGGATGCTCGATCTTTCCGGCAATGCTCTCACCGGAACTGTCCCGGAGAATATTGGAAACGTGACCCAGCTCCAGTTCCTCGACCTCAGTAACAATCTCCTTTCAGGTTATCTCCCACTGATTCTCTTCACTGGAACACAGTCTTTAATCTCCCTGGACATTTCTAACAATTCATTTTCCCGTACAATACCACCGGAAATCGGTAATTTGAAGAACCTCAGTGCCCTCTATATCGgcaataataaattatccGGTAAGCTGCCCTCTCAAATCGGTGAGCTTACCAGGCTTGAAATCCTCTATTCACCTTCCTGTTTTATAGAAGGTCCACTGCCTGAAGAAATGTCTAGACTACAGGCATTGACTAAACTTGACCTTTCTTACAATCCCTTGAAGTGTTCGATTCCAAAGTTTTTGGGAAAGTTGCAGAATCTGAGAATTCTGGACCTCGTTTTCTCGGAGCTCAATGGGCCAATTCCATCTGAGCTTGGAAGTTGTAGGAACTTGAGGTCTTTGatcctttctttcaattcacTTTCTGGGTCATTGCCAGAGGAGCTTTCTGAGCTTCCTATAATAACGTTTTCCGCTGAAAAGAATCAGCTTCATGGGCCGTTGCCTGCTTGGCTTGGAAAGTGGAATCAAATTGAATCTCTTCTGCTCTCTGCTAATAAATTTTCTGGGGCAATTCCTCCCGAACTTGGCAATTGCTCTTCGATGCAGCACCTAAGTTTGAGCAGCAACTTGCTGACAGGCCCCATACCCGAAGAGCTCTGTAATGCTGCAGCGTTGTTGGAGATTGATCTTGATGATAATCTCCTTTCGGGCACGATTGAGAAGACATTTGTTAAGTGTAAGAACATTACCCAGTTGGTTTTGATGAACAATCAGATCACTGGTTCTGTACCCCAGTACCTTTCAGAGCTTCCATTGATGGTGCTTGACTTGGACTCGAACAATTTTAGTGGAAAAATTCCTCCAAGCCTATGGAATTCATCTAATCTGATGGAATTTTCTGCTGCTAATAACCTTTTAGAGGGCTCTCTTCCTGTGGAAATTGCGAATGCAGTTTATCTAGAGAGACTTGTCCTTAGTAACAATCAACTGAGAGGTACTATACCAAAGGAAATTGGAAGACTCACAAGCTTGGCTGTTCTTAATTTGAACTCTAATCTGTTTGAAGGGAATATTCCTACTGAGCTTGGAGACTGCATTTCGTTGACCACGTTGGACCTAGGAAATAATCAATTCTATGGGTCCATTCCTGGGAAACTGGTTGAACTAAGCCAGTTACAGTGCCTTGTTCTTTCTCATAATAATCTGTCTGGGTCAATTCCTGCAAAGCCATCTTTCTATTTCCGGCAGGTTACCATCCCTGATTTAAGCTTTGTTCAACACCTTGGGGTATTGGATCTGTCGTATAATAGATTGTCTGGATCAATACCTGATGAACTGGGGAGCTGTTTGGTGGTGGTGGACCTTCTGCTTAGCAACAATATGCTCTGTGGTACAATTCCAAAATCGCTCTCTCGCTTGACAAATCTTACAACATTGGATCTATCTGCTAACTTGCTGTCTGGTACCATTCCACCAGAACTTGGAGATTCCCTCAAGCTCCAGGGATTATATTTGGGAAAGAATCAACTCACGGGAACCATCCCACGAAGTTTGGGAAGGTTAAGTAGTTTGGTTAAGCTGAATTTGACAGGAAATAAGCTGTCTGGTCCAATTCCAGTCAGTTTTGGGAACTTGAAAGAGCTTAGCCACTTGGATTTGAGCTTCAATGAGCTCAGTGGTGAGCTTCCGTCCTCTCTGTCAGGTGTACAAAGTCTTGTTGGCCTTTATGTTCAGCAGAACAGGCTTTCTGGGTCGGTTGGGAAGCTCTTTTCAAACTGTATCGTTTGGAGGATAGAAACAATGAATTTGAGTAACAATTTCTTCACTGGAGACTTGCCGCTATCTCTGGGAAATCTTTCATACTTGACAAATTTGGATCTTCATGGTAATATGATTACTGGAGAGATTCCTTCGGACCTTGGGAATCTAATGCAATTGGAGTATTTCGATGTTTCAGTTAACAGGCTATCTGGAAATATTCCTGAGAAGATATGCAGCCTGGTCAACCTGAACAACCTAGACTTGTCTGAAAACAGATTGGAAGGACCAATACCTCGAACTGGTCTCTGCCTGAACCTATCCAGAGTTAGACTTGCGGGGAACAAGAATCTTTGTGGGCGGATTTTGGGTGTAGATTGTCATCTCAAGAGCATCGATAAATCTGCGTTGTTTAATGCATGGAGACTTGCTGCTGTTGCCATTACAATAACATTGATGACTCTTACAGTTGGTTTTGCACTGCATCGATGGATTAACAGGAGGCAAAATGATCCTGAGGAATTTGAGGAACGCAAGCTAAACAGTTACATGGATCAAAATCTTTATTTCTTGAGCAGTAGCAGATCAAAGGAACCTTTAAGCATCAATGTAGCAATGTTTGAGCAGCCTCTTCTGAAATTAACTTTGGTTGACATCCTTGAAGCTACCGACAACTTCAGCAAGACAAACATAATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCACTTTACCTAATGATAAAAGGGTTGCTGTGAAGAAGCTGAGTGAAGCTAAAACGCAGGGTCAACGTGAGTTCATAGCTGAAATGGAGACCTTGGGAAAGGTAAAGCATCAAAATCTTGTTCCATTGCTCGGATATTGCTCCATTGGTGAGGAGAAACTTCTTGTCTATGAATACATGGTAAATGGAAGCTTAGACCTTTGGTTGAGAAACAGGACTGGGGCCCTAGAAGTGCTTGATTGGGAAAAACGTTACAAAATAGCAACTGGCTCTGCCCATGGATTGGCTTTCCTTCATCACGGTTTCATCCCCCACATCATTCACAGGGATGTAAAAGCTAGCAACATTTTGCTCAATGAAGACTTTGAACCCAAAGTTGCAGACTTTGGACTGGCAAGACTAATCAGTGCATGTGAGACTCATATCACCACTGATATTGCTGGAACATTCGGTTACATTCCACCAGAGTATGGACAGAGTGGGAGGTCCACAACAAAAGGAGACGTTTATAGTTTTGGTGTCATTTTGCTTGAATTGGTGACAGGAAAAGAGCCAACTGGACCTGATTTTAAAGAGATTGAAGGTGGAAATTTGGTTGGATGGGTGTTTCAGAAGATCAAGAAGGGGCAGGCTGCTGATGTTCTTGACCCAGTAGTTCTCGATGCAGATTCGAAGCAGATGATGCTTCAAGTGTTGCAGATTGCTTGTGTTTGCCTCTCAGATAATCCTGCAAACAGGCCTACCATGCTCCAAGTACTCAAGTTCCTCAAGGGGATTAAAGGGGAATG 3878 0.435 MAFNLLFCYLFVFQLATAFVHQNEETSEKNSLLSFKTSLENPRFLASWNPSTPHCSWVGVTCQLGRVTSLSLATRSLNGPLSSSLFSLSSLTVLNLSSNALFGEIPSQIAHLRNLKELSLSDNQFSGEIPRELGELIHLETLKLGSNLFTGKIPPELGLLTELRMLDLSGNALTGTVPENIGNVTQLQFLDLSNNLLSGYLPLILFTGTQSLISLDISNNSFSRTIPPEIGNLKNLSALYIGNNKLSGKLPSQIGELTRLEILYSPSCFIEGPLPEEMSRLQALTKLDLSYNPLKCSIPKFLGKLQNLRILDLVFSELNGPIPSELGSCRNLRSLILSFNSLSGSLPEELSELPIITFSAEKNQLHGPLPAWLGKWNQIESLLLSANKFSGAIPPELGNCSSMQHLSLSSNLLTGPIPEELCNAAALLEIDLDDNLLSGTIEKTFVKCKNITQLVLMNNQITGSVPQYLSELPLMVLDLDSNNFSGKIPPSLWNSSNLMEFSAANNLLEGSLPVEIANAVYLERLVLSNNQLRGTIPKEIGRLTSLAVLNLNSNLFEGNIPTELGDCISLTTLDLGNNQFYGSIPGKLVELSQLQCLVLSHNNLSGSIPAKPSFYFRQVTIPDLSFVQHLGVLDLSYNRLSGSIPDELGSCLVVVDLLLSNNMLCGTIPKSLSRLTNLTTLDLSANLLSGTIPPELGDSLKLQGLYLGKNQLTGTIPRSLGRLSSLVKLNLTGNKLSGPIPVSFGNLKELSHLDLSFNELSGELPSSLSGVQSLVGLYVQQNRLSGSVGKLFSNCIVWRIETMNLSNNFFTGDLPLSLGNLSYLTNLDLHGNMITGEIPSDLGNLMQLEYFDVSVNRLSGNIPEKICSLVNLNNLDLSENRLEGPIPRTGLCLNLSRVRLAGNKNLCGRILGVDCHLKSIDKSALFNAWRLAAVAITITLMTLTVGFALHRWINRRQNDPEEFEERKLNSYMDQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATDNFSKTNIIGDGGFGTVYKATLPNDKRVAVKKLSEAKTQGQREFIAEMETLGKVKHQNLVPLLGYCSIGEEKLLVYEYMVNGSLDLWLRNRTGALEVLDWEKRYKIATGSAHGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTKGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVFQKIKKGQAADVLDPVVLDADSKQMMLQVLQIACVCLSDNPANRPTMLQVLKFLKGIKGE 1292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01435 1292 Gene3D Ribonuclease Inhibitor 207 355 IPR032675 -
Bva03g01435 1292 Gene3D Ribonuclease Inhibitor 616 917 IPR032675 -
Bva03g01435 1292 Gene3D Ribonuclease Inhibitor 356 615 IPR032675 -
Bva03g01435 1292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1136 1148 IPR008271 GO:0004672|GO:0006468
Bva03g01435 1292 ProSiteProfiles Protein kinase domain profile. 1014 1292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01435 1292 Pfam Leucine Rich Repeat 211 233 IPR001611 GO:0005515
Bva03g01435 1292 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 358 613 - -
Bva03g01435 1292 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 260 473 - -
Bva03g01435 1292 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 474 1290 - -
Bva03g01435 1292 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 354 - -
Bva03g01435 1292 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 263 - -
Bva03g01435 1292 Gene3D Transferase(Phosphotransferase) domain 1 1090 1292 - -
Bva03g01435 1292 SUPERFAMILY L domain-like 359 610 - -
Bva03g01435 1292 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Bva03g01435 1292 SUPERFAMILY L domain-like 39 355 - -
Bva03g01435 1292 SUPERFAMILY L domain-like 616 908 - -
Bva03g01435 1292 SMART LRR_typ_2 112 136 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 627 651 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 675 699 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 233 257 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 869 893 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 88 111 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 723 746 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 329 353 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 281 305 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 160 183 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 747 771 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 821 845 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 543 567 IPR003591 -
Bva03g01435 1292 SMART LRR_typ_2 184 208 IPR003591 -
Bva03g01435 1292 ProSitePatterns Protein kinases ATP-binding region signature. 1020 1043 IPR017441 GO:0005524
Bva03g01435 1292 PRINTS Leucine-rich repeat signature 163 176 - -
Bva03g01435 1292 PRINTS Leucine-rich repeat signature 675 688 - -
Bva03g01435 1292 SUPERFAMILY Protein kinase-like (PK-like) 995 1286 IPR011009 -
Bva03g01435 1292 SMART LRR_sd22_2 233 259 - -
Bva03g01435 1292 SMART LRR_sd22_2 88 117 - -
Bva03g01435 1292 SMART LRR_sd22_2 281 302 - -
Bva03g01435 1292 SMART LRR_sd22_2 747 773 - -
Bva03g01435 1292 SMART LRR_sd22_2 675 690 - -
Bva03g01435 1292 SMART LRR_sd22_2 160 183 - -
Bva03g01435 1292 SMART LRR_sd22_2 845 871 - -
Bva03g01435 1292 SMART LRR_sd22_2 821 844 - -
Bva03g01435 1292 Pfam Protein tyrosine and serine/threonine kinase 1017 1286 IPR001245 GO:0004672|GO:0006468
Bva03g01435 1292 Gene3D Phosphorylase Kinase; domain 1 977 1089 - -
Bva03g01435 1292 SMART serkin_6 1014 1286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01435 1292 Pfam Leucine rich repeat 138 197 IPR001611 GO:0005515
Bva03g01435 1292 Pfam Leucine rich repeat 676 736 IPR001611 GO:0005515
Bva03g01435 1292 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Bva03g01435 1292 Gene3D Ribonuclease Inhibitor 137 206 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01435 Bva-Chr3 13646460 13650338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01435 26 1289 Receptor kinase-like Gene Family AT5G07280 59.323 0.0 1424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bva03g01435 PK_Tyr_Ser-Thr 4.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01435 - - gmx:100808726 1981.45