Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01430 ATGATTCAATCCAAACAATCCCACTCGACCCTAATCATATGGCTTCTTCTCCTCCTCGTGCCATGGTCATTCCATGGCGCCCATGCGCAGCCAGCTACAAAAGCAGGGTCTCCAAAGGGTTCAGATAACAGCGTGATAGTTGTATTCGCCGTTTACGCCTTCTTGTTCATGGGCTTTTTTGTAGTCTTCGTCTGCCATTGCTTCGCAATACAAGTCGCCGGAGAAAACCCAATCACGGTGTCCTCTTCCTGCCAGGGTATTGCCCCAGAAGTCCTTGATACTTTTCCGGTCCATGTTTACTCGACTAtcaaagaccaaaaaataGGCAAAGGGGCGCTTGAATGTGCAGTGTGCTTGAGTGAATTTAAAGAATACGAGACTCTAAGGTTGTTGCCCATATGCAACCATGTCTTCCACTCGGATTGCATCGACGCCTGGTTAGCTTCTCATATTACTTGTCCCGTTTGTCGCACAAAGCTGAGGCCAGATTGCGAAGAAGTGGCCGTAATAATTCCACCCGAGTG 524 0.4733 MIQSKQSHSTLIIWLLLLLVPWSFHGAHAQPATKAGSPKGSDNSVIVVFAVYAFLFMGFFVVFVCHCFAIQVAGENPITVSSSCQGIAPEVLDTFPVHVYSTIKDQKIGKGALECAVCLSEFKEYETLRLLPICNHVFHSDCIDAWLASHITCPVCRTKLRPDCEEVAVIIPPE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01430 174 SMART ring_2 115 156 IPR001841 -
Bva03g01430 174 PANTHER RING FINGER DOMAIN-CONTAINING 11 165 - -
Bva03g01430 174 CDD RING-H2_PA-TM-RING 114 157 - -
Bva03g01430 174 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE 11 165 - -
Bva03g01430 174 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Bva03g01430 174 Pfam Ring finger domain 114 157 IPR001841 -
Bva03g01430 174 SUPERFAMILY RING/U-box 114 163 - -
Bva03g01430 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 163 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01430 Bva-Chr3 13613993 13615548 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01430 44 174 Rapid Response to Elicitors AT3G05200 45.752 6.90e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01430 K10664 - fve:101295180 154.066