Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01428 ATGATTCAATCCAGACAATCCCACTTGACCTTACTCAGATGGGTTCTTCTCCTCCTCGTACCATGGTCATTCCATGGCGCCTATGCGCAGTCAGCTACAAAAGTAGGGCCTCCCGAGGATTCAGATTACAGTGTGATACTTGTGGTGGGCGTTTGCTCCTTCACGTTCATGGGTATCTTTTTAGCTTTCATCTGCCATTGCTTCGACACAGAAATCACCGGAGAAAATCCAATCACGGTGTCCTGTTCCTGTCGGGGTATTGCGCCGGAAGTCCTTGGTACTTTTCCGATCCTTATCTACTCGACTATCAAAGACCACAAAATAGGCAAAGGGGCGCTTGAATGTGCAGTGTGCTTGAGTGAATTTAAAGACTGCGAGACTCTGAGGTTGTTGCCCAAATGCAACCACGTCTTCCACCCAGATTGCATCGACGCCTGGTTAGCATCCCATGTTACTTGTCCGGTTTGCCGGGCAAAGCTGAGGCCAGATTGTGAAGAAGTGGCCACAGTAATTCCGGCTGAGTTAAATGCTCACCAAGTGCTCGAGGAAAGTTCTCTTAGTAGAACCGAACTGGGTGAGGCAGAGCAACACCCAGAAGGTCAGAGGAATGGAAACCGTGGGGCGAGTGACATACATGGGTCAGCCGGAAAGCAGAGACAGACATCAAAATCgaaaattttaagtaaccTTGTGAGGTCCAATTCCACTGGTCACTCTTTGGTTGAACGCGGGAAGGACATGGAAAGGTATACTCTGAGGTTGCCGGAGGAGGTGAGGAAGCACATTCTGGTCAACCATGAAGGACTTCGGCGTTCTGCAAGCTACGACGTTATTTTTCCCAGGGAATGGAGCTCAAGGAGAGTTTATAAGGGTGACTGCGAAGGAAGCAGCAAATGTTGGGAACAGATTAGAACAATGTTTTA 923 0.4821 MIQSRQSHLTLLRWVLLLLVPWSFHGAYAQSATKVGPPEDSDYSVILVVGVCSFTFMGIFLAFICHCFDTEITGENPITVSCSCRGIAPEVLGTFPILIYSTIKDHKIGKGALECAVCLSEFKDCETLRLLPKCNHVFHPDCIDAWLASHVTCPVCRAKLRPDCEEVATVIPAELNAHQVLEESSLSRTELGEAEQHPEGQRNGNRGASDIHGSAGKQRQTSKSKILSNLVRSNSTGHSLVERGKDMERYTLRLPEEVRKHILVNHEGLRRSASYDVIFPREWSSRRVYKGDCEGSSKCWEQIRTMF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01428 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 164 IPR013083 -
Bva03g01428 307 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Bva03g01428 307 SUPERFAMILY RING/U-box 114 163 - -
Bva03g01428 307 CDD RING-H2_PA-TM-RING 114 157 - -
Bva03g01428 307 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE 36 282 - -
Bva03g01428 307 PANTHER RING FINGER DOMAIN-CONTAINING 36 282 - -
Bva03g01428 307 Pfam Ring finger domain 114 157 IPR001841 -
Bva03g01428 307 MobiDBLite consensus disorder prediction 214 229 - -
Bva03g01428 307 SMART ring_2 115 156 IPR001841 -
Bva03g01428 307 MobiDBLite consensus disorder prediction 186 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01428 Bva-Chr3 13611616 13612539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01428 44 287 Rapid Response to Elicitors AT3G05200 41.036 2.16e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01428 K10664 - fve:101295180 218.009