Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01427 ATGGAACCCAAACGATTCCATTTCTTTACCCTTCTCGCATGGGCATGGCTTCACCTTCACCTTGTTCTCTTCTATGGCGGCGCTGATGCACAGTCAGCTATACAACCAGCTCCTTCCTTTGCCACCCACAGTGGGTGGGACCCATCATTTGCTCTTATGGTTGCTGCCCTCACCTGCGCTTTGCTATTTATGGCTTTCTTTTCGGTTTACCTTCGCCACTGCGCTGAGTCATACAACGCCGCCCACAATCGAAATGGTGCTGCCGGAGATTGGCCCTGTTCCTGCCCTCAAGGCGTAAAGCCGGAGCTGCTGAAAACGTTTCCGATATTTGTCTACTCTGCCGTCAAAGACCTCAAAATTGGAAGAGGAGTCCTTGAATGCTCAGTGTGTTTAGGTGAGTTTAAGGATCAGGAAACTCTCCGAATGTTGCCCAAATGCAGCCATGTTTTCCACTCTGATTGCATCGACGGCTGGTTAGCTTCTCATATCACCTGCCCTGTTTGTCGCTGTAAATTGAGTACAAACACCGGGGAAGTAGCCATTGCAGTGCCCACCCAATTGGACGCTGACCAATTGGATGATGAAAATTCTGTTAGAATTGAAGTGGGTGAACTAGAGCAACACCAACGCCCAGTGGAGTATAACGAGAATAGTGATCAGAACAGAGCCGATGAAGCTAATGGGAAGCCCAAGTCGAGGAAGCTGGGGATGCTCGTGAGGTCGAACTCAACGGGCCATTCTTTGGTTGAACCAGGGAAAGATCTGGACAGATATACGCTGAGGTTGCCGGAGGAGGTGAGGAAGCGTATTCTGGTTGATGATCGGCGTTGTGCAATCTATCATCTTGAGTTTCCCAGAGAAGGAAGTTCCCAGAATTCGAAGAGGTTATGCTGGAGTGACAACGAAGGGAGTAGTAGAGACAGTAACAATAGTGAGCGCCAAGGTGGGCGGTTGAATCGGTGGGTTCTATTAAGGACTCCGCCATTTGGAGAGAGGAAAATTCTTTG 1007 0.4945 MLPKCSHVFHSDCIDGWLASHITCPVCRCKLSTNTGEVAIAVPTQLDADQLDDENSVRIEVGELEQHQRPVEYNENSDQNRADEANGKPKSRKLGMLVRSNSTGHSLVEPGKDLDRYTLRLPEEVRKRILVDDRRCAIYHLEFPREGSSQNSKRLCWSDNEGSSRDSNNSERQGGRLNRWVLLRTPPFGERKIL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01427 194 MobiDBLite consensus disorder prediction 149 174 - -
Bva03g01427 194 Pfam Ring finger domain 4 28 IPR001841 -
Bva03g01427 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 53 IPR013083 -
Bva03g01427 194 PANTHER RING-H2 FINGER PROTEIN ATL11 1 140 - -
Bva03g01427 194 ProSiteProfiles Zinc finger RING-type profile. 5 28 IPR001841 -
Bva03g01427 194 SUPERFAMILY RING/U-box 2 37 - -
Bva03g01427 194 MobiDBLite consensus disorder prediction 70 90 - -
Bva03g01427 194 MobiDBLite consensus disorder prediction 70 95 - -
Bva03g01427 194 PANTHER RING FINGER DOMAIN-CONTAINING 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01427 Bva-Chr3 13608287 13609622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01427 1 188 Rapid Response to Elicitors AT3G05200 35.204 1.03e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01427 K10664 - fve:101295180 142.51