Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01394 ATGGACGCTCCGACACTCACCGGTTTGTTGAGTCAGGTTGCCGGAGAGTTCCCCTCCCGCCGTGCCATCTCCGTTGCCGGCAAGTTCGATCTTTCTCATTCTCGCCTTCATGAACTTGTCGAACGCGCCGCTTATCGTTTAGTCGCAGCCGGAATCAACGCCGGCGATCTCGTCGCTCTCACCTTCCCCAACACCGTTGAGtttgttatAACATTTATAGCCGTGATTCGAGCTCGAGCTACGGCTGCGCCGCTTAACCCAGCGTACACACCGGAGGAGTTTGAGTTCTATTTATCAGATTCAGAATCGAAGCTCTTAATAACTTCCCAAGAAGGGAACAAGCCGGCTGAAGCCGCGGCATCCAAGCTGAAGATCCCTCATGCCACGGCTTCGCTTTCCAAAGCCGATGATCACGAGCTCTCTCTTTCGCTGAGTCAGTTCGAGTCAGAAGCTGACTCTATTGCCGAGCTCGTCAATGATCCTTCCGACGTAGCTCTATTCCTTCACACCTCCGGCACCACGAGCCGCCCCAAGGGCGTTCCTCTGACTCAATTCAACTTAGCTTCCTCGGTGAAGAACATAAAGTCCGTGTACAAACTCACTGAGTTTGACTCGACCGTCATCGTTCTACCATTGTTTCACGTTCATGGATTGATCGCCGGACTGATGAGTTCACTCGGAGCTGGCGCGGCGGTGGCGCTTCCGGCGGCGGGTCGGTTCTCGGCTTCAACATTTTGGTCAGACATGCTTCAATTCACCGCAACGTGGTACACGGCGGTTCCTACCATACACCAAATCATATTGGATCGCCACCTCAGCAACCCGGAACCCGTTTACCCGAAACTTCGGTTCATTCGGAGCTGTAGCGCGTCTCTGGCACCGAGTATACTGCATCGGTTGGAGGAGTCATTCGGTGCACCGGTTTTGGAGGCGTACGCGATGACCGAGGCGGCCCATCTAATGTCATCAAACCCGTTACCGGAGGATGGCCCGCACAAACCCGGGTCGGTCGGGAAACCAGTGGGTCAAGAAATGGCAATATTGGATGAGAAGGGGGAGGCGCACAAGGCAGAGGTTAAGGGAGAGGTTTGTATTGGGGGTCCGAATGTGACAAAAGGGTATAAAAATAACCCGGAAGCTAACAAAGCAGCCTTTCAGTTTGGTTGGTTTCATACGGGTGATCTCGGGTTCTTAGATTCGGATGGTTATTTGCATCTTGTGGGTCGGATCAAGGAACTGATCAACCGTGGAGGGGAGAAGATATCACCGATTGAAGTGGATGCAGTGCTTTTGTCTCATTCAGACATTGCTCAAGCTGTCGCTTTTGGAGTGCCAGATGAGAAATATGGTGAAGAGATAAATTGTGCAATTATTCCAAGAGAAGGATCAAACATTGATGAGGCAGAGGTGCAGAGGTTTTGTAAGAAAAATCTAGCAGCCTTTAAAGTCCCCAAAAAGGTCTTCATTACTGATTCTTTGCCGAAGACCGCCTCCGGCAAGATTTTACGGCGGCTTGTGGCGGAACACTTCCATTCTCATGTTTG 1544 0.5149 MDAPTLTGLLSQVAGEFPSRRAISVAGKFDLSHSRLHELVERAAYRLVAAGINAGDLVALTFPNTVEFVITFIAVIRARATAAPLNPAYTPEEFEFYLSDSESKLLITSQEGNKPAEAAASKLKIPHATASLSKADDHELSLSLSQFESEADSIAELVNDPSDVALFLHTSGTTSRPKGVPLTQFNLASSVKNIKSVYKLTEFDSTVIVLPLFHVHGLIAGLMSSLGAGAAVALPAAGRFSASTFWSDMLQFTATWYTAVPTIHQIILDRHLSNPEPVYPKLRFIRSCSASLAPSILHRLEESFGAPVLEAYAMTEAAHLMSSNPLPEDGPHKPGSVGKPVGQEMAILDEKGEAHKAEVKGEVCIGGPNVTKGYKNNPEANKAAFQFGWFHTGDLGFLDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHSDIAQAVAFGVPDEKYGEEINCAIIPREGSNIDEAEVQRFCKKNLAAFKVPKKVFITDSLPKTASGKILRRLVAEHFHSHV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01394 514 Pfam AMP-binding enzyme 12 416 IPR000873 -
Bva03g01394 514 Gene3D - 2 409 IPR042099 -
Bva03g01394 514 PANTHER ACYL-COA SYNTHETASE 4 512 - -
Bva03g01394 514 CDD FACL_fum10p_like 18 508 IPR045310 GO:0016874
Bva03g01394 514 ProSitePatterns Putative AMP-binding domain signature. 167 178 IPR020845 -
Bva03g01394 514 PANTHER OXALATE--COA LIGASE-LIKE 4 512 - -
Bva03g01394 514 SUPERFAMILY Acetyl-CoA synthetase-like 5 512 - -
Bva03g01394 514 Pfam AMP-binding enzyme C-terminal domain 425 500 IPR025110 -
Bva03g01394 514 Gene3D - 410 512 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01394 Bva-Chr3 13379809 13383213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01394 5 514 Monolignol Biosynthesis Gene Families AT4G05160 31.015 2.39e-62 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01394 K22133 - gmx:100783685 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01394 03 13379809 13383213 Bva04g01154 04 7767813 7771622 ECH
Bva03g01394 03 13379809 13383213 Bva03g01394 03 13379809 13383213 ECH