Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01386 ATGAACGGCATTGTCGTTTTGGCATTGGCGGCATTTGTAACATTCGCGCCATGGCGGGTACGCTCAGAAGGACAGAGGCTTCAGGTGGGCATGACGCTGGTTCGAAACGCTCGCTCTCTCGGTGCTCTTTGTCTAGATGGGAGTTTGCCGGCGTATCATTTGCACAAAGGATTCGGAGCTGGAGCCAACAATTGGCTTCTACAATTCGAGGGTGGCGGATGGTGCAACGACATTCAATCATGCCTGGAGAGAGCCAAAACACGCCATGGATCATCACGTTATATGAACAGGTGGGAGGTCTTCTCTGGGATCCTAAGTAACAATGCCTCTCTCAATCCAGATTTCTACAATTGGAACCGTGTGAAGCTTAGATATTGTGATGGAGCTTCATTTGTTGGAAATACCATCTTCAATAATGGGACATCGTTGCTTTATTTCAAAGGGCAAAAGATTTGGGAAGCAATAATTCATGACCTTCTACCCAAAGGTTTGGGGAAGGCACGCAAGGCTTTGCTTTCAGGCTGTTCTGCAGGAGGTTTAGCAACTTTTCACCACTGTGATAACTTTACCAAGTATTTACCAAACAATGCCAGTGTGAAATGCTTAAGTGATGCTGGATTTTTTCTTGACGCAAGAGACATCACTTTGAACCATACTATGAGGTTCTTCTTCAAAAGTCTTGTTTCGTTACAGGGGGTAGAGCAAAACCTAAATAGAAACTGCACcagttctctcttttttccagACTTGTGCTTCTTCCCTCAATATACTTTGAAGTATATATCAACACCATATTTTATCTTGAACTCAGCTTATGACGTATTTCAATTTCATCATTCATTGGTTCCACCTTCTGCTGATCCACGAGGACACTGGAATCACTGCAAGCTGAATCCGAAAGCATGCAATCCATCCCAGCTTAATAAACTGCAAGGTTTTAGACACTACATGCTTGCAACTTTGAGACCATTCTACATATATTCAGGAAGAGGGGGAATGTATATCAATTCATGTTTTGCTCATTGCCAAAGTGAATCACAAGACACATGGTTTGGAGCTGATTCTCCAAGAATAAACAGTAAGACTATTGCAGAAGCAGTTGGTGATTGGTATTTCAGCAGAAACAGATCAAAGGAAATAGACTGTGCATACCCATGTGATAGAACCTGTAAAAATCTTATACCATA 1187 0.4187 MNGIVVLALAAFVTFAPWRVRSEGQRLQVGMTLVRNARSLGALCLDGSLPAYHLHKGFGAGANNWLLQFEGGGWCNDIQSCLERAKTRHGSSRYMNRWEVFSGILSNNASLNPDFYNWNRVKLRYCDGASFVGNTIFNNGTSLLYFKGQKIWEAIIHDLLPKGLGKARKALLSGCSAGGLATFHHCDNFTKYLPNNASVKCLSDAGFFLDARDITLNHTMRFFFKSLVSLQGVEQNLNRNCTSSLFFPDLCFFPQYTLKYISTPYFILNSAYDVFQFHHSLVPPSADPRGHWNHCKLNPKACNPSQLNKLQGFRHYMLATLRPFYIYSGRGGMYINSCFAHCQSESQDTWFGADSPRINSKTIAEAVGDWYFSRNRSKEIDCAYPCDRTCKNLIP 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01386 395 PANTHER NOTUM-RELATED 22 395 IPR004963 GO:0016787
Bva03g01386 395 Pfam Pectinacetylesterase 24 375 IPR004963 GO:0016787
Bva03g01386 395 PANTHER PECTIN ACETYLESTERASE 9 22 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01386 Bva-Chr3 13265975 13273458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01386 5 395 Carbohydrate Esterase AT5G23870 68.702 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01386 K19882 - mnt:21389932 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01386 03 13265975 13273458 Bva03g01386 03 13265975 13273458 ECH