Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01380 ATGGAAGAGGACAAAAATGGTTTGATACCGAAAGCCCTAGCTCTCTTCGTCGCCAGCCTCACTCCGGTGCAGAGAAACGACACAGCAAGGATGGCTCCTAAGCAGCCAAGTACAGGTTTGTTTGTTGGATTGAACAAGGGTCATATTGTGACCAAGAAGGAATTAGCTCCACGCCCCTCTGACCGCAAAGGCAAAACAAGTAAGCGGGTGCACTTTGTGAGGAACTTGATCCGTGAAGTTGCTGGTTTTGCTCCATATGAGAAGAGGATCACTGAGCTTTTGAAGGTAGGAAAGGACAAGAGGGCACTTAAAGTTGCCAAGAGAAAGTTGGGAACTCACAAGAGGGccaagaagaagagagaagagatgtCCAACGCGCTCAGGAAGATGAGGGCTGGTGGAGCCGAACACAAGAAGAAGTG 422 0.4668 MEEDKNGLIPKALALFVASLTPVQRNDTARMAPKQPSTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKMRAGGAEHKKK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01380 140 Pfam Ribosomal protein L36e 38 131 IPR000509 GO:0003735|GO:0005840|GO:0006412
Bva03g01380 140 ProSitePatterns Ribosomal protein L36e signature. 85 95 IPR000509 GO:0003735|GO:0005840|GO:0006412
Bva03g01380 140 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 22 140 - -
Bva03g01380 140 PANTHER 60S RIBOSOMAL PROTEIN L36 22 140 IPR000509 GO:0003735|GO:0005840|GO:0006412
Bva03g01380 140 MobiDBLite consensus disorder prediction 109 140 - -
Bva03g01380 140 Gene3D 60S ribosomal protein L36 28 138 IPR038097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01380 Bva-Chr3 13215307 13218380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01380 31 135 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 80.952 1.80e-56 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01380 K02920 - zju:107414508 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01380 03 13215307 13218380 Bva04g01165 04 7880890 7882606 ECH
Bva03g01380 03 13215307 13218380 Bva03g01380 03 13215307 13218380 ECH