Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01377 ATGGCTTCGAACGATTCGAATCAACTTGATAGCACCGAGGCTACAGCAGGATCGAATCCACGCCCAAAACTTCGAGTTGTTGCCAAAATCAAGGGCTCTCCGACTGAGAAGGTAGGGTGGATTTCTGTGAACAAGCCAAGTGGAGAGAGCTCCGAGAGTGTCGCAATCTCCTTCAGTGAGCAATCTACCAGCAGTCGAAAGGAGTCTTATTTGCTGGACTATTGCTACgagcaaaatgaagaaaatgaaattatttattcaagaGAAGTCAAGCCACTTATTACAGCAGCTTTTGAAGGTCATAACAGCACTATTGTAGCATATGGAGCAAGAGGGAGTGGGAAAACCCATTTAATCCAGgGTACTACTGAGAAACCAGGATTGGCAATGCTTGCTATGACTGGATTTCTCTCAATGGTAGAGCAAAATAAGAAATCTATCGCTGTTTCTTTCTACGAGGTTGATCATCAGGAGCATGCTTTTGATTTACTAACACCAGGACAGCcagaaatttttgtttttgaagatAGAGGCAGGATTCAGTTCAAAGGACTTTCTCAGATCCCTGTGAAGTCCATTTCAGAATTTCAGAAGTTATATGTCACTGCTTGTGCTGCACGAAAGTTAGACATGAAAAAAGGCAACGAACGTGCTATTAGAAGCCACATGGGATTTATAGTGCATACTTTTTCCTCCAATGAAAGCAAAGAAACTAGTTATGTgggaaaaatgaattttgttgaCATGGCAGGTTATGAAGATGCTAGAAGAAAAAGTACTCATGGATCTAACCTTGTGGAGACTAACAAGATTAATAAGTCCATTTATGCTTTGTTGAATGTCTTTCATGCTTTGAATGCCAATGAAAGTCGTGTTCCATACAGAGAAAGCAAACTTACACGCTTGTTGCAGGATTCCCTAGGAGGCACCAGCAAAATTTTGGTGGTAGCCTGCTTGAACCACTCCTGCCAAGACAGTATTTACATAGTAAGCTTAGTATCACGGTTATCTCAAGGAATTCATCGGACTTCCTTAAATTTCACAAAGAAATGTGGCAGTTCAGCAAGACAGGCAATGCATGTTTCTCAGAAGAGCCAGATGCTAAAGAGTGTTCCCACAACTGCAAAGAAGTTAGCTAGTTCTAGATCTAATATACATGAAAAGAAAGCTGCTGGTGTTATGAAATCCGCAATGAAAGGAAGGAAATTATTTGATGAAGCAAGTTATTCTGCTAAAGCCGAGAAGACAATGTCACTGTCAGATACTGTTTCAACCTTGGAGACTTCGGTGCAGGAAAAGATGCAGGTTAATGCTTCATCAGATGCTAAGAATCATGAGGAACCCAGTACCAGAGTGGAAGAGgataatttattttcgtATGGCCCTAGCGATGATATGAAACCCAACCCAGTGGTGGAAAATGATGCCTTTGTGGAAAGCGAGAATCATCAAGAGGAACACGAATCTGTTGACTACTCAAAAGCATTGTCTATAATTGAGGAAGGTCATATAATGGACAAGGAGAATAGCAGCCTAATGGCCAATGAAGATGGATCACCTCTCATTAGTGCACAACTTCGTGAGTTGTCAAACAATCTAAAGTCTCTCTATTATTCAACTCCATCATGCATGAAGATACCAGAAGAGAGATATATCTCATTTGATAATCAAGCGTCTGTTGATATTGTGGAACCAAAAACTCCTGTAAATGAACAAAGTGTGAAGACTAAGGATAGATGGGACATAGCTAATTTCAACAGTCCTTGGGAGGCATACAGCCAGCGTAGTTCTGGGATGAAGAATTCTCTTATTGAAGACTATCTTAGGGTTTTAAACACAGCTAACAAGGAAGAATTGAAAAAGTTAAAGGGTATTGGGGAGAAGAGAGCAACCTACATACTTGAGCTTCGTGAAGAATCTCCCGAACCTTTCAAGAGTCTTGATGATTTAAAGGACATTGGACTTTCAGCAAAGCAGATTAAGGGAATGATGAAAAAAGTAGCTGGGGAACTTTTCAGTTA 2021 0.3924 MASNDSNQLDSTEATAGSNPRPKLRVVAKIKGSPTEKVGWISVNKPSGESSESVAISFSEQSTSSRKESYLLDYCYEQNEENEIIYSREVKPLITAAFEGHNSTIVAYGARGSGKTHLIQGTTEKPGLAMLAMTGFLSMVEQNKKSIAVSFYEVDHQEHAFDLLTPGQPEIFVFEDRGRIQFKGLSQIPVKSISEFQKLYVTACAARKLDMKKGNERAIRSHMGFIVHTFSSNESKETSYVGKMNFVDMAGYEDARRKSTHGSNLVETNKINKSIYALLNVFHALNANESRVPYRESKLTRLLQDSLGGTSKILVVACLNHSCQDSIYIVSLVSRLSQGIHRTSLNFTKKCGSSARQAMHVSQKSQMLKSVPTTAKKLASSRSNIHEKKAAGVMKSAMKGRKLFDEASYSAKAEKTMSLSDTVSTLETSVQEKMQVNASSDAKNHEEPSTRVEEDNLFSYGPSDDMKPNPVVENDAFVESENHQEEHESVDYSKALSIIEEGHIMDKENSSLMANEDGSPLISAQLRELSNNLKSLYYSTPSCMKIPEERYISFDNQASVDIVEPKTPVNEQSVKTKDRWDIANFNSPWEAYSQRSSGMKNSLIEDYLRVLNTANKEELKKLKGIGEKRATYILELREESPEPFKSLDDLKDIGLSAKQIKGMMKKVAGELFS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01377 673 SUPERFAMILY RuvA domain 2-like 605 667 IPR010994 -
Bva03g01377 673 Gene3D Kinesin motor domain 5 338 IPR036961 -
Bva03g01377 673 ProSiteProfiles Kinesin motor domain profile. 23 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva03g01377 673 PANTHER KINESIN-RELATED 23 667 IPR027640 GO:0003777|GO:0007018
Bva03g01377 673 Pfam Helix-hairpin-helix motif 611 659 - -
Bva03g01377 673 Gene3D - 599 670 - -
Bva03g01377 673 MobiDBLite consensus disorder prediction 1 23 - -
Bva03g01377 673 PRINTS Kinesin heavy chain signature 292 313 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva03g01377 673 PRINTS Kinesin heavy chain signature 100 121 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva03g01377 673 PRINTS Kinesin heavy chain signature 212 229 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva03g01377 673 PRINTS Kinesin heavy chain signature 243 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva03g01377 673 MobiDBLite consensus disorder prediction 1 18 - -
Bva03g01377 673 SMART kinesin_4 21 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva03g01377 673 Pfam Kinesin motor domain 50 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva03g01377 673 PANTHER KINESIN-LIKE PROTEIN KIN-10C 23 667 - -
Bva03g01377 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 346 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01377 Bva-Chr3 13199307 13204341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01377 66 315 Calmodulin-binding Proteins AT5G65930 30.350 9.11e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01377 K10403 - gmx:100779826 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01377 03 13199307 13204341 Bva03g01377 03 13199307 13204341 ECH