Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01367 ATGCCTTCATGGTGGGGGAAATCGtcatcaaaagaaatcaagaagaaagcaagtaaAGAAGGTTTTATTGATGCATTACACCGAAAATTTAAGATCCCATCTGAAGGTAAAGTAAACAATAGATCTGGAGGATCTCATAGACATTGCAGTGACACAATTTCTGAGAAAGGGGCTCGGTCTCCTGCTGAATCAAGATCTCCTTCTCCCACTAGAGTTGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTAATGCTCAGCCACTACCAGTACCACTTCCTGGCCTGCATCCTTCTAGTGTAAGCCGAACAGATTCTGAAATTAGTATATCATCAAAGTCAAGACAGGAGAAGGGTTCCAAGCCATCATTGTTTCTGCCTCTTCCCAGGCCTGCATGCATACGTAATAGGCTGAATCCAGCAGATTTGGACGGGGACCTGGTCACTGCTTCAATCTCTAGTGAGAGCTCTGCTGTTAGTGATGAGCCAGCAGACTCACGTAGTCGTAGTCCTCTGGCAACTGACTGCGAGAATGGGCCTAGAACTGCTGCAAGCAGCCCTTCCAGCTTGGTACTGAAGGATCAAACAACTAGTGCTTCCCAAATAAATTTGAGAGATGCCAAAAAGCCAGCTAACATTCTCAGTAATCATTTATCTCCAACATCACCAAAAGGGAGACCTTTAAGCAAACATGTGCCAAATCTACAGGTTCCCCATCATGGTGCCTTCTGTAGTGCTCCAGATAGCTCCATGTCAAGTCCTTCAAGAAGTCCAATGAGAGCATTTGGTACAGAACAAGTGTTAAACTCTGCCTTTTGCTCTGCAAAGCCATATTCGGAGGTCAACTTGATTGGATCTGGTCACTGCTCGAGTCCAGGTTCTGGTCACAATTCAGGACATAATTCAATGGGAGGTGACATGTCAGGACAGTTATTTTGGCAACCAAGCAGGGGGAGTCCTGAGTATTCTCCTGTACCTAGTCCCAGAATGACAAGCCCTGGTCCAAGCTCAAGAATTCAGAGTGGTGCTGTCACACCAATTCATCCTAGAGCTGGGGGCACTCCAGCTGATTCACAGTCTGTACCTAGTCCCAGAATGACAAGCCCTGGTCCAAGCTCAAGAATTCAGAGTGGTGCTGTCACACCAATTCATCCTAGAGCTGGGGGCACTCCAGCTGATTCACAGTCAGTATGGGTAGACGAGGGAAAACAACGGAGTCATCGTCTGCCCCTTCCTCCTTTAACCGTTACTCATCCATCACCTTTCTCTCAATCAAATTCAGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGGAAGAGCAGATAATCCAATGAGCCCTGGATCACGTTGGAAAAAAGGAAAGCTGCTGGGCAGTGGCACATTTGGACATGTATATGTTGGTTTCAATAGTGAAAGCGGTGAAATGTGTGCAATGAAGGAGGTCACTCTGTTTTCAGATGATGCCAAGTCTAAGGAAAGTGTGAAGCAATTAATGCAGGAAATTGCTCTATTAAGCCGATTAAGGCATCAAAATATTGTGCAGTATTATGGTTCTGAAACAGTAGGTGATAGGCTTTACATCTACCTAGAATATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATACGGTCAATTTGGTGAACTTGCTATCCGTAGTTATACTCAACAAATTTTGTCGGGGCTTGCTTTTCTACATGCTAAGAATACTGTTCACAGGGACATCAAAGGGGCAAATATACTGGTAGATCCAACTGGTCGGGTCAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACATCAGCACCATTATCATTCAAGGGAAGCCCATATTGGATGGCTCCTgagGTTATAAGGAATTCTAATGGTTGCAACCTGGCTGTGGATATCTGGAGTCTTGGATGCACAGTTTTTGAAATGGCTACTACTAAGCCTCCTTGGAGTCAGTTTGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCGGCAATCCCAGGTCATCTCTCAAAAGAGGGAAAGGATTTTATTAGGAAATGCTTACAACGTAATCCACAAGATCGTCCTTCAGCTAGTGAACTGTTGAACCACCCTTTTGTAAAATGTGCTACACCGTTGGAAAGACCTATTCAGAGCCCTGAAGCACTAGATGTGGTCCCTGGGATTGTACAAGGAGTGAAAGCTCTGGGCGTTGGACAAGGAAGAAACCATTCTAATTTGGATTCAGACAGACTTTCTATTCATTCTTCTAGGGTTTTGAAAACTAATCCTCATGCCagTGAAATCTATATTCCAAAGAATATATCTTGCCCAGTCTCTCCCATTGGAAGCCCACTTTTGCGGTCAAGGTCACCACAGCACATGAATGGGAGAATGTCTCCCTCTCCTATATCCAGCCCTCGGACTGCTTCTGGTGCATCCTCGCCTCTCACTGGCGGTAGTGGTGCCATTCCATTTAGTAATCACCTAAAACAGTCAGTTTACTTTCATGAATGTCTTGGAAGCTTACCAAAGCCCTCAAACAGTGTCTACATTAATAGCCCTACAGCTCCTGTCCATCATGACTCAAACGTTGACATCTTTCGAGGAATGCAAATGGGGTCTCACATTACTTCAGAACTGGTGAGTGAAAATGATGTTACGGGTAAGCAGCTTGCAGTGCCTGCTCACGCTGAGTCCTATGATGTTCAGTCAGTCTTGGCTGATCGGGTTTGCCGACAGCTGCTGGGGGAACATGGTAAGATTAACCCATCTTTGGATCTAAGTCCTAACTCATCCTTACTGAGCAGAGCAAATGGCTTGTTGTATAGCTCGGATCCTTGCAAGTTGAGCAAACTATGCCGGGGCATGAAACGTTCAGATGTTCAATTCATTTATACCTTCTTGTTCAAATGCTCATCTTTGGCAAAGAAGCTTGCAGTTGCATGTAGCATATATGCAGCATCAATCCATGAAAAGTTGATAGCTCGGAATTTTGCCTA 2990 0.4448 MPSWWGKSSSKEIKKKASKEGFIDALHRKFKIPSEGKVNNRSGGSHRHCSDTISEKGARSPAESRSPSPTRVARCQSFAERPNAQPLPVPLPGLHPSSVSRTDSEISISSKSRQEKGSKPSLFLPLPRPACIRNRLNPADLDGDLVTASISSESSAVSDEPADSRSRSPLATDCENGPRTAASSPSSLVLKDQTTSASQINLRDAKKPANILSNHLSPTSPKGRPLSKHVPNLQVPHHGAFCSAPDSSMSSPSRSPMRAFGTEQVLNSAFCSAKPYSEVNLIGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPADSQSVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPADSQSVWVDEGKQRSHRLPLPPLTVTHPSPFSQSNSAATSPSMPRSPGRADNPMSPGSRWKKGKLLGSGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESVKQLMQEIALLSRLRHQNIVQYYGSETVGDRLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAFLHAKNTVHRDIKGANILVDPTGRVKLADFGMAKHITSAPLSFKGSPYWMAPEVIRNSNGCNLAVDIWSLGCTVFEMATTKPPWSQFEGVAAMFKIGNSKELPAIPGHLSKEGKDFIRKCLQRNPQDRPSASELLNHPFVKCATPLERPIQSPEALDVVPGIVQGVKALGVGQGRNHSNLDSDRLSIHSSRVLKTNPHASEIYIPKNISCPVSPIGSPLLRSRSPQHMNGRMSPSPISSPRTASGASSPLTGGSGAIPFSNHLKQSVYFHECLGSLPKPSNSVYINSPTAPVHHDSNVDIFRGMQMGSHITSELVSENDVTGKQLAVPAHAESYDVQSVLADRVCRQLLGEHGKINPSLDLSPNSSLLSRANGLLYSSDPCKLSKLCRGMKRSDVQFIYTFLFKCSSLAKKLAVACSIYAASIHEKLIARNFA 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01367 996 Gene3D Transferase(Phosphotransferase) domain 1 447 720 - -
Bva03g01367 996 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 356 - -
Bva03g01367 996 MobiDBLite consensus disorder prediction 288 315 - -
Bva03g01367 996 ProSitePatterns Protein kinases ATP-binding region signature. 455 478 IPR017441 GO:0005524
Bva03g01367 996 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 356 848 - -
Bva03g01367 996 MobiDBLite consensus disorder prediction 782 816 - -
Bva03g01367 996 MobiDBLite consensus disorder prediction 416 435 - -
Bva03g01367 996 MobiDBLite consensus disorder prediction 288 451 - -
Bva03g01367 996 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 356 - -
Bva03g01367 996 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 356 848 - -
Bva03g01367 996 MobiDBLite consensus disorder prediction 29 54 - -
Bva03g01367 996 MobiDBLite consensus disorder prediction 354 377 - -
Bva03g01367 996 MobiDBLite consensus disorder prediction 147 162 - -
Bva03g01367 996 SMART serkin_6 449 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01367 996 CDD STKc_MEKK1_plant 448 703 - -
Bva03g01367 996 Pfam Protein kinase domain 450 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01367 996 MobiDBLite consensus disorder prediction 97 117 - -
Bva03g01367 996 MobiDBLite consensus disorder prediction 57 73 - -
Bva03g01367 996 SUPERFAMILY Protein kinase-like (PK-like) 447 704 IPR011009 -
Bva03g01367 996 MobiDBLite consensus disorder prediction 29 228 - -
Bva03g01367 996 MobiDBLite consensus disorder prediction 169 203 - -
Bva03g01367 996 ProSiteProfiles Protein kinase domain profile. 449 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01367 996 MobiDBLite consensus disorder prediction 778 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01367 Bva-Chr3 13138425 13145145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01367 1 929 MAP Kinase Kinase Kinase AT1G63700 55.272 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva03g01367 Pkinase 5.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01367 K20717 - gmx:100819762 1372.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01367 03 13138425 13145145 Bva04g01170 04 7948189 7948746 ECH
Bva03g01367 03 13138425 13145145 Bva03g01367 03 13138425 13145145 ECH