Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01357 ATGGCGGCTGAAATCGGGAAGAAAGAAGAGCTTCTGAAGCTGAAAGTCACGGGCAAAAGCCATGTGAagccaaacaagaaaattgggAAGAAAGAGTTCCAGCTCGTGACATTCGATCTTCCCTACCTGGCCTTCTACTACAACCAGAAGCTGCTGTTCTATAAAGGCACTGACTTTGAGGAAATGGTGAAGAAACTCAAAGATGGGCTCAGCGTGGTCTTAGAGGACTTTTATCAACTAGCGGGTAGGCTTGGGAAAGATGAGGAGGGTGTGTTCAGAGTGGAATATGACGATGACTTGCCCGGTGTGGAGATCACAGAAGCTGTTGCTGATGATGTGGGTGTTGCAGATCTAGCTGTGGCAGAAAGTTGCAGCAATTTGAAAGAGTTGATACCTTACGGTGGGATCTTGAACTTGGAAGGCATGCAGAGGCCCTTATTGGCAATTCAGTTAACTAAGCTGAAAGACGGACTCGCGATGGGGTGCGCGTTCAACCACGCGGTTCTTGATGGGACGTCCACGTGGCACTTCATGATCTCGTGGTCTGAGATCTGCAGAGGTGCTCCCTCCACGTCAGTGCTACCCTTCTTGGAACGCACCAAAGCTCGCAACACGAGCGTGAAGCTCGACCTCTCACTCCCTTCTGATCCACTCGCCGCATCCAACGGCGATGTGAAGCCGGACCCACCAGCACCACTGAGAGAGAAGATCTTCAGGTTCTCAGAGTCAGCCATCGACAAGATCAAATCAACGGTCAACGAAAACCCTCCATCTGACGGCTCAAAACCGTTCTCAACATTCCAGGCTCTCTCCACTCATATTTGGCGCCATGTAACCCATGCACGTAACCTTAAACCTGAAGACTACACTGTCTTCACCGTCTTTGTGGATTGCCGGAAAAGGGTAGAGCCGCCGATGCCGGAGGCTTACTTCGGCAACCTAATTCAAGCCATATTCACCGTGACGGCGGCGGGGTTGTTATCGGCGCACCCGCCGCAATTCGGTTCATCCTTAATTCAAAAAGCAATTGAAGCCCACAATGCCAAGGCCATTGATGAACGAAACAAAGAGTGGGAGAGTGCACCAAAGATTTTCCAATACAAAGATGCCGGGGTGAACTGCGTGGCCGTCGGAAGCTCGCCGAGGTTCAAGGTTTACGACGTGGATTTCGGGTGGGGGAAGCCGGAGAATGTGAGGAGTGGATcgaataacaaatttaatggGATGGTGTATTTGTATCCAGGGAAGAGTGGAGGGAGGAGCATTGATGTGGAGCTAACTCTGGAGCCTGAGGCTATGGGGAGGTTGGAGAAAGATAAGGACTTCCTTTTGGAGGTTTA 1340 0.497 MAAEIGKKEELLKLKVTGKSHVKPNKKIGKKEFQLVTFDLPYLAFYYNQKLLFYKGTDFEEMVKKLKDGLSVVLEDFYQLAGRLGKDEEGVFRVEYDDDLPGVEITEAVADDVGVADLAVAESCSNLKELIPYGGILNLEGMQRPLLAIQLTKLKDGLAMGCAFNHAVLDGTSTWHFMISWSEICRGAPSTSVLPFLERTKARNTSVKLDLSLPSDPLAASNGDVKPDPPAPLREKIFRFSESAIDKIKSTVNENPPSDGSKPFSTFQALSTHIWRHVTHARNLKPEDYTVFTVFVDCRKRVEPPMPEAYFGNLIQAIFTVTAAGLLSAHPPQFGSSLIQKAIEAHNAKAIDERNKEWESAPKIFQYKDAGVNCVAVGSSPRFKVYDVDFGWGKPENVRSGSNNKFNGMVYLYPGKSGGRSIDVELTLEPEAMGRLEKDKDFLLEV 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01357 446 Gene3D - 11 210 IPR023213 -
Bva03g01357 446 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 17 442 - -
Bva03g01357 446 Pfam Transferase family 13 442 - -
Bva03g01357 446 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 17 442 - -
Bva03g01357 446 Gene3D - 218 439 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01357 Bva-Chr3 13085367 13087403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01357 12 446 Monolignol Biosynthesis Gene Families AT5G48930 26.386 3.74e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01357 K19747 - gmx:100818158 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01357 03 13085367 13087403 Bva03g01357 03 13085367 13087403 ECH