Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01347 ATGTCGTCGCCGGGATTCACAGGCGGTGGAGCATCGGATTTTTTCGGCGGAGCTGGAGGATATTCTGGCCGATCCATGACTGCAACCACCATGAACAACCCCACTACTGGTATCAACAGCAACCTTCATGCTTCTAATCCTCTGTACCGGACCCAGCAGCAGCTACCTGCAATTTTTCTTGATCCTTCTTCACAGATCGCTCGACAAACACCCAACTTAATTGGTAAGCGAACCCTTGCTGAATTTCAGAACCAGCAGAACCCTAACCATGTTCTGTCAAATCTTCTACTACGCTCTGTAAAGCCCAGAACTTTTCAGCATAATTCTCCCATGTCACCGATTTCACCCATGGATTTTTCCATGTCCCCTGAATTGCCAAACTCTTCGGGTTTCTCGTCACAGCGTCTTGGCATGCCCTTTCTTCAGCAACTTCGCACTCAACCCATCAATCTCCCTCTCCCAAACGGGAATTTACCCATGAGCAATTGCAATTCAATACTCAACACTACCCTGCCCTACCCAACAAATACTTCTAATTTGGTTCAGGTTCCCAACAGAGTTGGTCCAGCTCAGGAGCCTGCGAAGAAGGTTATAGACCATCGGCTGCTGGAGCTGGAAAAACAACTTTTGGAAGATAATGATGAGGAAGAAGGTGATACAGTCTCTGTGATTACCAACAGCGAGTGGTCAGATACAATACAGAACCTGAACCTGATTGCTCCGGGACAAAAACCTATTTCCTCCTCACCCACTTCGTCTACAACGTCTTcgacttcttcttcttcatctgtaGCATCCCCTGCTTCCAGCTGCTCAAGACAGTCACTAATGGAGGCCGCATCTGCAATTTCCGAAGGGAAAACGGAAGCTGCCTTGGAGATCCTTGCTCGTTTGTCACATGTTTCAAATCCAAATGGGAATTCGGATCAGAGATTGACAGATTGCATGGTGTCGGCTCTGAGATCGCGGCTGAATCCACTTGAACACCCACCTCCCGTAGCAGAGCTTTTCAGCAAGGAACACAACGAGTCGACTCAGATGCTCTTCGACATGGCGCCCTGCTTCAAGGTTGGGTTCATGGCTGCCAATCTTGCCATCCTCGAAGCTGCATTAGAGGATAAAACCGAGAATGGTACCAAGCTCCGTgttgttgattttgatatcGGGCAGGGGAACCAGTACGTGAATCTCTTACACGCGCTGTCTTCGCGCCAGAATGGGAAACCAGCCACGGTGAAGATCACCGCTGTAGCCGAGAATGGTGGCGAAGAAAGGTTGAAGCCGGTGGGTGATATGCTGAAAAAACTAGCAGTCCAGTTCGGGGTTGGCTTCGAATTCAATGTGTTCACTCAGAAACTCGGGGAGCTGACTCGCGAGACTCTGGGTTGCGAGCCCGACGAGTCACTGGCAGTGAATTTCGCCTTCAAAATGTACAGAATGGCCGACGAGAGCGTGTCTACGGAGAACCCAAGAGATGACCTTCTCCGGCGCGTGAAGGGCTTGGCCCCACGAATCGTGACGCTGGTGGAACAAGAGATGAACACCAATACGGCGCCGTTCATGGCTCGGTTTACCGAGTCATGCTCATATTACGGTGCTCTGTTTGACTCAATCGAGTCAATAACGCCGAGGGATCACCCGGACCGAGTCAAAGTAGAGGAAGGACTGAGTCGGAGACTCGGGAACGCGATCGCTTGCGAAGGGAGGGATCGCGTGGAAAGATGCGAAGTGTTTGGGAAGTGGCGGGCCCGCATGGGCATGGCGGGGTTCCAGTTAAAACCAATGAGTCAGGGCATAGCCGACTCAATCAAGGCGCGACTCAATCCTGTCAAACCAATTAACCCGGGCTTTACCGTCAAAGAAGAGAATGGTGGGATTTGCTTCGGTTGGATGGGTCGGACTCTCACCGTCGCATCTGCTTGGCGTTA 1928 0.5016 MSSPGFTGGGASDFFGGAGGYSGRSMTATTMNNPTTGINSNLHASNPLYRTQQQLPAIFLDPSSQIARQTPNLIGKRTLAEFQNQQNPNHVLSNLLLRSVKPRTFQHNSPMSPISPMDFSMSPELPNSSGFSSQRLGMPFLQQLRTQPINLPLPNGNLPMSNCNSILNTTLPYPTNTSNLVQVPNRVGPAQEPAKKVIDHRLLELEKQLLEDNDEEEGDTVSVITNSEWSDTIQNLNLIAPGQKPISSSPTSSTTSSTSSSSSVASPASSCSRQSLMEAASAISEGKTEAALEILARLSHVSNPNGNSDQRLTDCMVSALRSRLNPLEHPPPVAELFSKEHNESTQMLFDMAPCFKVGFMAANLAILEAALEDKTENGTKLRVVDFDIGQGNQYVNLLHALSSRQNGKPATVKITAVAENGGEERLKPVGDMLKKLAVQFGVGFEFNVFTQKLGELTRETLGCEPDESLAVNFAFKMYRMADESVSTENPRDDLLRRVKGLAPRIVTLVEQEMNTNTAPFMARFTESCSYYGALFDSIESITPRDHPDRVKVEEGLSRRLGNAIACEGRDRVERCEVFGKWRARMGMAGFQLKPMSQGIADSIKARLNPVKPINPGFTVKEENGGICFGWMGRTLTVASAWR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01347 642 MobiDBLite consensus disorder prediction 241 270 - -
Bva03g01347 642 Pfam GRAS domain family 273 642 IPR005202 -
Bva03g01347 642 ProSiteProfiles GRAS family profile. 263 642 IPR005202 -
Bva03g01347 642 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 67 641 IPR005202 -
Bva03g01347 642 PANTHER SCARECROW-LIKE PROTEIN 8 67 641 IPR030013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01347 Bva-Chr3 13020118 13022046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01347 41 642 GRAS Transcription Factor Family AT5G52510 51.741 4.11e-180 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva03g01347 GRAS 3.4e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01347 - - tcc:18605613 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01347 03 13020118 13022046 Bva03g01347 03 13020118 13022046 ECH