Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01325 ATGGCGGCCGGAATCTCCACCGCCATAACCTTAAAACCCTTCCGGGTTTTCCAGTCTTGCTCAGAACCTCTCACAAAGCCTGCTCCTACGCTGCTCTTCAACTTCAACCCCTTAAGATGTTTCCCTCACAGCACAATTCGCCGAACCCGCAGAATGACGAGCTTGACCGTTTGCGTTCTCATGAAGGATCCAAAACAGAGTACCCAGATCGAGACTTCGCCGGAGGAAGCTCCGAATCAAGTGGATTCCCAAGTTATATCAGCTCGCTTAGCTGAGAAATTGGCCAGAAAACGATCCGAGAGGTTTGCTTATCTTGTGGCGGCGGTGATGTCCAGCTTTGGAATCACTTCTATGGCGGTTATGGCTGTTTATTATAGATTCTCGTGGCAAATGGAGGGTGGAGAAATTCCTTGGTCTGAAATGTTTGGTACATTTGCTCTCTCAGTGGGCGCTGCGGTGGGTATGGAGTTTTGGGCAAGATGGGCTCATAGAGCTCTCTGGCATGCTTCCCTATGGCACATGCACGAGTCCCACCATCGACCCAGAGAAGGTGCATTCGAATTGAACGATGTTTTCGCCATAGTAAACGCTGTCCCAGCAATCGGTCTCCTTTCCTACGGTTTATTCCACAAGGGTCTGGTCCCTGGTCTCTGTTTCGGTGCCGGTCTTGGGATTACAGTGTTTGGGATGGCTTACATGTTCGTCCACGATGGATTGGTTCATAAAAGATTCCCTGTGGGACCCATTGCCAACGTGCCCTACTTCAGAAGGGTCGCTGCTGCTCACCAGCTCCACCATTCAGAGAAATTCGACGGTGTGCCGTATGGGCTGTTTTTGGGACCAAAAGAAGTTGAAGAAGTAGGAGGACTAGAAGAGCTGGAGAAGGAGATAAGtaggagaaaaaaatcacaaactcTTTCAAGATG 926 0.4892 MAAGISTAITLKPFRVFQSCSEPLTKPAPTLLFNFNPLRCFPHSTIRRTRRMTSLTVCVLMKDPKQSTQIETSPEEAPNQVDSQVISARLAEKLARKRSERFAYLVAAVMSSFGITSMAVMAVYYRFSWQMEGGEIPWSEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHRPREGAFELNDVFAIVNAVPAIGLLSYGLFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSEKFDGVPYGLFLGPKEVEEVGGLEELEKEISRRKKSQTLSR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01325 308 PANTHER BETA-CAROTENE HYDROXYLASE 20 303 - -
Bva03g01325 308 Pfam Fatty acid hydroxylase 151 278 IPR006694 GO:0005506|GO:0008610|GO:0016491
Bva03g01325 308 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 20 303 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01325 Bva-Chr3 12857597 12860193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01325 1 221 Chloroplast and Mitochondria Gene Families AT4G25700 64.159 2.67e-96 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01325 K15746 - gmx:100802778 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01325 03 12857597 12860193 Bva04g01182 04 8065021 8067872 ECH
Bva03g01325 03 12857597 12860193 Bva03g01325 03 12857597 12860193 ECH